RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CUTCQ9NTM9 273 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 TXNDC16Q9P2K2 825 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 CTNNAL1Q9UBT7 734 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 MTRF1LQ9UGC7 380 aaKnown RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 KCND3Q9UK17 655 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 SNX7Q9UNH6 387 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 SPTBP11277 2137 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 FEZF1A0PJY2 475 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 HYKKA2RU49 373 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 C1QL1O75973 258 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ONECUT2O95948 504 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ITGB2P05107 769 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ENO2P09104 434 aaPredicted RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 HBQ1P09105 142 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 RAB40ALP0C0E4 278 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 FAM87AP0C7U9 286 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 CDH1P12830 882 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 GCAP28676 217 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 OR1D4P47884 311 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 SLC12A2P55011 1212 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 AP1S2P56377 157 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 RPS15P62841 145 aaKnown RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 IRF9Q00978 393 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 MEF2AQ02078 507 aaPredicted RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 RELAQ04206 551 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 CSHL1Q14406 222 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 NKAIN1Q4KMZ8 207 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 TCTE1Q5JU00 501 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 CATSPEREQ5SY80 951 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 MLIPQ5VWP3 458 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 MRPL14Q6P1L8 145 aaKnown RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 LCTLQ6UWM7 567 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 COX15Q7KZN9 410 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 VN1R4Q7Z5H5 301 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ISCA2Q86U28 154 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 IFT20Q8IY31 132 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 GSPT2Q8IYD1 628 aaKnown RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 CENPLQ8N0S6 344 aaPredicted RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 ZNF740Q8NDX6 193 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ABHD11Q8NFV4 315 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 OR4K1Q8NGD4 311 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ADAMTS17Q8TE56 1095 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ESAMQ96AP7 390 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 RHBDF1Q96CC6 855 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 NXNL1Q96CM4 212 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 TM4SF19Q96DZ7 209 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 C10orf90Q96M02 699 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 GPR78Q96P69 363 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 CYTH2Q99418 400 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 SLC7A5P2Q9GIP4 190 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 SPNS1Q9H2V7 528 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 EPB41L4BQ9H329 900 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 TMEM184CQ9NVA4 438 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 IRAK4Q9NWZ3 460 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ANKMY1Q9P2S6 941 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 TCFL5Q9UL49 500 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 RUVBL1Q9Y265 456 aaKnown RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 SLC22A14Q9Y267 594 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 MRPS2Q9Y399 296 aaKnown RBP9.29□□□□□ -0.92
YBX3-212ENST00000542002 OARD1Q9Y530 152 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 ASB1Q9Y576 335 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 MAU2Q9Y6X3 613 aa9.29□□□□□ -0.92
YBX3-212ENST00000542002 KCNE1BA0A087WTH5 132 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 A0A1B0GX78 115 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 CDC14CA4D256 554 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 NCF1BA6NI72 391 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 NCF1CA8MVU1 366 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 DSCR3O14972 297 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 SNPHO15079 494 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 FOXS1O43638 330 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 PRAMEF4O60810 478 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 CCNDBP1O95273 360 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 RECKO95980 971 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 ALDOAP04075 364 aaKnown RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 C2P06681 752 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 UMODP07911 640 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 NCF1P14598 390 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 EZRP15311 586 aaKnown RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 AGXTP21549 392 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 BCL6P41182 706 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 SLC6A12P48065 614 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 ARSFP54793 590 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 CDKL1Q00532 357 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 NAB1Q13506 487 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 GRM7Q14831 915 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 SLMAPQ14BN4 828 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 NCF4Q15080 339 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 TGFBIQ15582 683 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 UAP1Q16222 522 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 UGT8Q16880 541 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 TAF1BQ53T94 588 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 PRAMEF9Q5VWM5 478 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 CAPN13Q6MZZ7 669 aaPredicted RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 BORAQ6PGQ7 559 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 ADCK2Q7Z695 626 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 THOC6Q86W42 341 aaKnown RBP9.28□□□□□ -0.92
YBX3-212ENST00000542002 C17orf64Q86WR6 236 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 CSNK1A1LQ8N752 337 aa9.28□□□□□ -0.92
YBX3-212ENST00000542002 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms