RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 A0A087WUV0 522 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 A0A1B0GX78 115 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 HYKKA2RU49 373 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 HMX2A2RU54 273 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 FITM1A5D6W6 292 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 POC1B-GALNT4F8VUJ3 575 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ZNF500O60304 480 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 CREG1O75629 220 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 STATHP02808 62 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ITGB2P05107 769 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 INHBAP08476 426 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 RAB40ALP0C0E4 278 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 CD1DP15813 335 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 NPPBP16860 134 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 HRH2P25021 359 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ATP6V0D1P61421 351 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 CDKL1Q00532 357 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 SLC9A5Q14940 896 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 NCF4Q15080 339 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 TGFBIQ15582 683 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 OR4D1Q15615 310 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 DEFB109BQ30KR1 87 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 FAM214AQ32MH5 1076 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 C18orf21Q32NC0 220 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 FAM69BQ5VUD6 431 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 YOD1Q5VVQ6 348 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 MLIPQ5VWP3 458 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ZNF385CQ66K41 422 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 LCTLQ6UWM7 567 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 THOC6Q86W42 341 aaKnown RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 GPSM1Q86YR5 675 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 GSPT2Q8IYD1 628 aaKnown RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 METTL27Q8N6F8 245 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 CSNK1A1LQ8N752 337 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ENDOVQ8N8Q3 282 aaKnown RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 OR56A3Q8NH54 315 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 SLC44A1Q8WWI5 657 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 EXT2Q93063 718 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 PTERQ96BW5 349 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 CABS1Q96KC9 395 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 UBXN10Q96LJ8 280 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 TSNARE1Q96NA8 513 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ZNF285Q96NJ3 590 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 CATSPER2Q96P56 530 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 BBC3Q96PG8 261 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 OR2A5Q96R48 311 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 OR4K3Q96R72 315 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 PAFAH2Q99487 392 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 C17orf62Q9BQA9 187 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ARHGAP9Q9BRR9 750 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 FUT8Q9BYC5 575 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 NLNQ9BYT8 704 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 SYNPO2LQ9H987 977 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 SNX15Q9NRS6 342 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 TMEM184CQ9NVA4 438 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 GPN3Q9UHW5 284 aaPredicted RBP8.82□□□□□ -1
SNHG1-215ENST00000540904 TLK1Q9UKI8 766 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 TCFL5Q9UL49 500 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 PTPRQQ9UMZ3 2332 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 ZFHX4Q86UP3 3567 aa8.82□□□□□ -1
SNHG1-215ENST00000540904 A0A087X1B8 175 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 A0A096LPK6 155 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 FEZF1A0PJY2 475 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 CDC14CA4D256 554 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 ESPNB1AK53 854 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 DSCR3O14972 297 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 ATXN7O15265 892 aaPredicted RBP8.81□□□□□ -1
SNHG1-215ENST00000540904 WDR47O94967 919 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 ALDOAP04075 364 aaKnown RBP8.81□□□□□ -1
SNHG1-215ENST00000540904 C2P06681 752 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 CAPN1P07384 714 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 FURINP09958 794 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 LTA4HP09960 611 aaKnown RBP8.81□□□□□ -1
SNHG1-215ENST00000540904 FAM87AP0C7U9 286 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 TFEBP19484 476 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 ITGAXP20702 1163 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 TYK2P29597 1187 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 GRK3P35626 688 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 BCL6P41182 706 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 GDF5P43026 501 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 MSH2P43246 934 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 GCGRP47871 477 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 OR1D4P47884 311 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 HNMTP50135 292 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 SERPINB8P50452 374 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 CCR8P51685 355 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 PMS2P54278 862 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 RPS15AP62244 130 aaKnown RBP8.81□□□□□ -1
SNHG1-215ENST00000540904 CSNK1G2P78368 415 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 IRF9Q00978 393 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 MEF2AQ02078 507 aaPredicted RBP8.81□□□□□ -1
SNHG1-215ENST00000540904 RELAQ04206 551 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 DLG1Q12959 904 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 IL10RAQ13651 578 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 TBR1Q16650 682 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 HKDC1Q2TB90 917 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 PRTGQ2VWP7 1150 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 FBXO48Q5FWF7 155 aa8.81□□□□□ -1
SNHG1-215ENST00000540904 CATSPEREQ5SY80 951 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms