RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CHAC2Q8WUX2 184 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ISG20Q96AZ6 181 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 LGALS12Q96DT0 336 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PPM1MQ96MI6 270 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 NUSAP1Q9BXS6 441 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 RNF167Q9H6Y7 350 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 SEMA4BQ9NPR2 832 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 LIMD1Q9UGP4 676 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TEKT2Q9UIF3 430 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PPIEQ9UNP9 301 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 MAU2Q9Y6X3 613 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 MN1Q10571 1320 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 GSAPA4D1B5 854 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 AGAP5A6NIR3 686 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 EFCAB9A8MZ26 197 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 CCL22O00626 93 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PRMT5O14744 637 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 GABRDO14764 452 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 BEST1O76090 585 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PRKD3O94806 890 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 WISP3O95389 354 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 APOA1P02647 267 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PRR35P0CG20 571 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ZNF250P15622 560 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 LAG3P18627 525 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 POU3F3P20264 500 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 PTGS2P35354 604 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ETV3P41162 512 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 KRT6CP48668 564 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 DEFA1P59665 94 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 DEFA3P59666 94 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ERVK-8P63133 956 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TUBA1BP68363 451 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PRKG2Q13237 762 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 GALNT3Q14435 633 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PTPRNQ16849 979 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TRIM60Q495X7 471 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 VARS2Q5ST30 1063 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 ANKS6Q68DC2 871 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ENPP6Q6UWR7 440 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TUBA1AQ71U36 451 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TMCO2Q7Z6W1 182 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 CTU1Q7Z7A3 348 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 LDB1Q86U70 411 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 MON1AQ86VX9 555 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ZFAND4Q86XD8 727 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 FBXO39Q8N4B4 442 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 KCTD13Q8WZ19 329 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 FAM162AQ96A26 154 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 MRGPRX2Q96LB1 330 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 CEP19Q96LK0 163 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TMEM209Q96SK2 561 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 PKMYT1Q99640 499 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 RTP3Q9BQQ7 232 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 C6orf62Q9GZU0 229 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 DCSTAMPQ9H295 470 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 MMP27Q9H306 513 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 DPEP2Q9H4A9 486 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 SYTL2Q9HCH5 934 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 EVA1BQ9NVM1 165 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 MIOSQ9NXC5 875 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 OSGIN1Q9UJX0 560 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ARL5CA6NH57 179 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 FFAR3O14843 346 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 SLC16A6O15403 523 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 GPR42O15529 346 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 RGS10O43665 173 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 FAM20BO75063 409 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 FTH1P02794 183 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 HLA-DQB2P05538 268 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 ITGAMP11215 1152 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 CSF2RAP15509 400 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 CD36P16671 472 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 RPL9P32969 192 aaKnown RBP5.09□□□□□ -1.6
PROM1-220ENST00000540805 DAOAP59103 153 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 GNG2P59768 71 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 LILRA4P59901 499 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 CYP4F8P98187 520 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 IRF8Q02556 426 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 EIF4EBP2Q13542 120 aaPredicted RBP5.09□□□□□ -1.6
PROM1-220ENST00000540805 RAPSNQ13702 412 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 DSC3Q14574 896 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 OR4D1Q15615 310 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 UAP1L1Q3KQV9 507 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 CCBE1Q6UXH8 406 aaPredicted RBP5.09□□□□□ -1.6
PROM1-220ENST00000540805 B3GNT8Q7Z7M8 397 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 GALNT12Q8IXK2 581 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 DPP10Q8N608 796 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 FAM86B1Q8N7N1 296 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 FNDC5Q8NAU1 212 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 KLHDC9Q8NEP7 349 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 FBXO22Q8NEZ5 403 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 OR2T12Q8NG77 320 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 SCAMP5Q8TAC9 235 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 WRAP53Q9BUR4 548 aaKnown RBP5.09□□□□□ -1.6
PROM1-220ENST00000540805 C1QTNF6Q9BXI9 259 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 ZCCHC2Q9C0B9 1178 aaKnown RBP5.09□□□□□ -1.6
PROM1-220ENST00000540805 SMOC2Q9H3U7 446 aa5.09□□□□□ -1.6
PROM1-220ENST00000540805 CARS2Q9HA77 564 aaKnown RBP5.09□□□□□ -1.6
PROM1-220ENST00000540805 NMUR1Q9HB89 426 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 309.3 ms