RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 FAM219BQ5XKK7 198 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 KANK2Q63ZY3 851 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 FAM91A1Q658Y4 838 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 TMEM71Q6P5X7 295 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 USP53Q70EK8 1073 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 SYVN1Q86TM6 617 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 MARCH9Q86YJ5 346 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 OR52E1Q8NGJ3 308 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 AGR3Q8TD06 166 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 MCOLN3Q8TDD5 553 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 SKA2Q8WVK7 121 aaPredicted RBP10.22□□□□□ -0.77
ATL3-204ENST00000540699 RSC1A1Q92681 617 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 LIN37Q96GY3 246 aaPredicted RBP10.22□□□□□ -0.77
ATL3-204ENST00000540699 FAR2Q96K12 515 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 TMEM74Q96NL1 305 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 ZNF382Q96SR6 550 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 EGFL8Q99944 293 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 NUDT22Q9BRQ3 303 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 HGH1Q9BTY7 390 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 TRIM54Q9BYV2 358 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 MID1IP1Q9NPA3 183 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 SEMA4BQ9NPR2 832 aaPredicted RBP10.22□□□□□ -0.77
ATL3-204ENST00000540699 ARL15Q9NXU5 204 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 WWOXQ9NZC7 414 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 SEMA5BQ9P283 1151 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 HEY2Q9UBP5 337 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 DKK4Q9UBT3 224 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 ATXN7L1Q9ULK2 861 aaPredicted RBP10.22□□□□□ -0.77
ATL3-204ENST00000540699 ICKQ9UPZ9 632 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 TRAF6Q9Y4K3 522 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 ENTPD2Q9Y5L3 495 aa10.22□□□□□ -0.77
ATL3-204ENST00000540699 AHCTF1Q8WYP5 2266 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 IGHV5-10-1A0A0J9YXX1 117 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 KRT87PA6NCN2 255 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 OR5K3A6NET4 321 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 MYO1CO00159 1063 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 SDHDO14521 159 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 AZIN1O14977 448 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 KDM1AO60341 852 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 CSO75390 466 aaKnown RBP10.21□□□□□ -0.77
ATL3-204ENST00000540699 ESRRBO95718 433 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 HIST1H2AGP0C0S8 130 aaPredicted RBP10.21□□□□□ -0.77
ATL3-204ENST00000540699 ANKRD34CP0C6C1 535 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 THRAP10827 490 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 ERGP11308 486 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 JUPP14923 745 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 TYRP1P17643 537 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 EPORP19235 508 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 HIST1H2ADP20671 130 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 PKLRP30613 574 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 SHMT2P34897 504 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 GDF5P43026 501 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 FOXA1P55317 472 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 PKNOX1P55347 436 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 BTKQ06187 659 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 TRAF3Q13114 568 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 TARDBPQ13148 414 aaKnown RBP eCLIP10.21□□□□□ -0.77
ATL3-204ENST00000540699 PRKG2Q13237 762 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 GTF2H2Q13888 395 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 KRT33BQ14525 404 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 PLCL1Q15111 1095 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 SPRED3Q2MJR0 410 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 COL28A1Q2UY09 1125 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 CCSMST1Q4G0I0 132 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 LACTB2Q53H82 288 aaPredicted RBP10.21□□□□□ -0.77
ATL3-204ENST00000540699 GTF2H2CQ6P1K8 395 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 KLHL35Q6PF15 583 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 LRRC70Q7Z2Q7 622 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 B3GNT8Q7Z7M8 397 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 PLXDC1Q8IUK5 500 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 ADGRF3Q8IZF5 1079 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 CLYBLQ8N0X4 340 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 OR52B6Q8NGF0 335 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 CFAP61Q8NHU2 1237 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 HMGCLL1Q8TB92 370 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 LCN9Q8WX39 176 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 RAD51AP1Q96B01 352 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 ERP27Q96DN0 273 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 PRR11Q96HE9 360 aaPredicted RBP10.21□□□□□ -0.77
ATL3-204ENST00000540699 AHCYL2Q96HN2 611 aaKnown RBP10.21□□□□□ -0.77
ATL3-204ENST00000540699 HIST1H2AHQ96KK5 128 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 CCDC138Q96M89 665 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 FOPNLQ96NB1 174 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 CD180Q99467 661 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 PKP4Q99569 1192 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 HIST1H2AJQ99878 128 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 H2AFJQ9BTM1 129 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 CCDC28BQ9BUN5 200 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 NUF2Q9BZD4 464 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 SEMA6CQ9H3T2 930 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 MEAF6Q9HAF1 191 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 TMEM9Q9P0T7 183 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 OPTCQ9UBM4 332 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 STK38LQ9Y2H1 464 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 RAXQ9Y2V3 346 aa10.21□□□□□ -0.77
ATL3-204ENST00000540699 A0A1W2PNU3 283 aaPredicted RBP10.2□□□□□ -0.78
ATL3-204ENST00000540699 FAM149AA5PLN7 773 aa10.2□□□□□ -0.78
ATL3-204ENST00000540699 TRPC5OSA6NMA1 111 aa10.2□□□□□ -0.78
ATL3-204ENST00000540699 BTN3A3O00478 584 aa10.2□□□□□ -0.78
ATL3-204ENST00000540699 HGSO14964 777 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms