RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 GTPBP3Q969Y2 492 aaKnown RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 DEFB118Q96PH6 123 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 HTATIP2Q9BUP3 242 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 KCTD5Q9NXV2 234 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 ZNF229Q9UJW7 825 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 CDH7Q9ULB5 785 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 SNX6Q9UNH7 406 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 ZNF510Q9Y2H8 683 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 CAB39Q9Y376 341 aaPredicted RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 MAP4K5Q9Y4K4 846 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 NUMA1Q14980 2115 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 ANTXRLA6NF34 631 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 TGFB1P01137 390 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 CDH3P22223 829 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 SOAT1P35610 550 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 HPCAL1P37235 193 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 EPHB3P54753 998 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 RELAQ04206 551 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 LRRC74AQ0VAA2 488 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 MAD2L1Q13257 205 aaPredicted RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 GBX1Q14549 363 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 INO80DQ53TQ3 878 aaPredicted RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 COX20Q5RI15 118 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 LHX8Q68G74 356 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 CIDECQ96AQ7 238 aaPredicted RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 FKBP10Q96AY3 582 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 SH3YL1Q96HL8 342 aaPredicted RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 ZNF641Q96N77 438 aaPredicted RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 CDK5RAP1Q96SZ6 601 aaKnown RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 SH3GL1Q99961 368 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 MRPL17Q9NRX2 175 aaKnown RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 C5AR2Q9P296 337 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 FZD4Q9ULV1 537 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 PLAGL1Q9UM63 463 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 INSL5Q9Y5Q6 135 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 SCAMP1O15126 338 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 KPNA5O15131 536 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 TEX28O15482 410 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 TSPAN6O43657 245 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 FABP3P05413 133 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 INHBBP09529 407 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 ETFAP13804 333 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 TTKP33981 857 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 CLK1P49759 484 aaKnown RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 NKX2-5P52952 324 aaPredicted RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 TMBIM6P55061 237 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 DEFB103AP81534 67 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 GAB1Q13480 694 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 SYTL3Q4VX76 610 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 DHRS4L2Q6PKH6 230 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 HSD11B1LQ7Z5J1 315 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 GOLM1Q8NBJ4 401 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 RIOK2Q9BVS4 552 aaKnown RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 SGK2Q9HBY8 427 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 RAD18Q9NS91 495 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 PCDHGA10Q9Y5H3 936 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 SNX8Q9Y5X2 465 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 HCFC2Q9Y5Z7 792 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 CFAP20Q9Y6A4 193 aaKnown RBP13.67□□□□□ -0.22
INO80E-203ENST00000540562 PLXNA3P51805 1871 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 MYO10Q9HD67 2058 aa13.67□□□□□ -0.22
INO80E-203ENST00000540562 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 PCDHGA12O60330 932 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 ADAM23O75077 832 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 SLC16A8O95907 504 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 C1SP09871 688 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 OR56A5P0C7T3 313 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 ACRP10323 421 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 HNF4AP41235 474 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 CLDN8P56748 225 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 RPS3AP61247 264 aaKnown RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 RPP38P78345 283 aaKnown RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 DOC2AQ14183 400 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 COLEC12Q5KU26 742 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 RBM48Q5RL73 367 aaKnown RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 TRIM46Q7Z4K8 759 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 PLD3Q8IV08 490 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 SYTL1Q8IYJ3 562 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 NAGSQ8N159 534 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 USP7Q93009 1102 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 DOK1Q99704 481 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 OR51B5Q9H339 312 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 SUV39H2Q9H5I1 410 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 REEP1Q9H902 201 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 TPT1P8Q9HAU6 139 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 HMX1Q9NP08 348 aaPredicted RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 SRRDQ9UH36 339 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 LSM7Q9UK45 103 aaKnown RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 PNMA8CA0A1B0GUJ8 204 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 ZSCAN9O15535 394 aaPredicted RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 KCNK5O95279 499 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 ANXA4P09525 319 aaPredicted RBP13.66□□□□□ -0.22
INO80E-203ENST00000540562 CD36P16671 472 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 CD6P30203 668 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 KDELR2P33947 212 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 BCAP31P51572 246 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 CDH12P55289 794 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 OLIG3Q7RTU3 272 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 P2RY8Q86VZ1 359 aa13.66□□□□□ -0.22
INO80E-203ENST00000540562 OR9Q2Q8NGE9 314 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms