RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FMO4P31512 558 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 YBX1P67809 324 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 CRADDP78560 199 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ABATP80404 500 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 BASP1P80723 227 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 EEF1A2Q05639 463 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 FAM53BQ14153 422 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 PCOLCEQ15113 449 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 HKDC1Q2TB90 917 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ICE2Q659A1 982 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 KIAA0930Q6ICG6 404 aaPredicted RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 MTFR2Q6P444 385 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 LRRC8BQ6P9F7 803 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 TMEM205Q6UW68 189 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 SUSD1Q6UWL2 747 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 NEK10Q6ZWH5 1172 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ARHGEF39Q8N4T4 335 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 SIRT6Q8N6T7 355 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 FBXO15Q8NCQ5 510 aaPredicted RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 SUN3Q8TAQ9 357 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 RERGQ96A58 199 aaPredicted RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 MFSD3Q96ES6 412 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 MMABQ96EY8 250 aaPredicted RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 TUBB6Q9BUF5 446 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 YIPF2Q9BWQ6 316 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 TSGA10Q9BZW7 698 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 DRC3Q9H069 523 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 PLA2G3Q9NZ20 509 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 SUCOQ9UBS9 1254 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 TAC3Q9UHF0 121 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 VPS9D1Q9Y2B5 631 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ZKSCAN5Q9Y2L8 839 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 ABCA12Q86UK0 2595 aa11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 MDC1Q14676 2089 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 DIDO1Q9BTC0 2240 aaKnown RBP11.4□□□□□ -0.58
CBX3P4-202ENST00000540428 CRYBG3Q68DQ2 2970 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 FOXS1O43638 330 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 RASAL1O95294 804 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 UQCRHP07919 91 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 PRF1P14222 555 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 TPSB2P20231 275 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 MGAT1P26572 445 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 PNLIPRP1P54315 467 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 KCNK10P57789 538 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 SIX1Q15475 284 aaPredicted RBP11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 TPSAB1Q15661 275 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 NDUFA9Q16795 377 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 LONRF1Q17RB8 773 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 KLHL38Q2WGJ6 581 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 ACSBG2Q5FVE4 666 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 HIBCHQ6NVY1 386 aaPredicted RBP11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 TMEM207Q6UWW9 146 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 GFRALQ6UXV0 394 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 ZC3H7AQ8IWR0 971 aaKnown RBP11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 ITLN2Q8WWU7 325 aaPredicted RBP11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 IMMP1LQ96LU5 166 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 UNKQ9C0B0 810 aaKnown RBP11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 SYNPO2LQ9H987 977 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 SYBUQ9NX95 663 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 KLHL42Q9P2K6 505 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 TEKT2Q9UIF3 430 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 SOX13Q9UN79 622 aa11.39□□□□□ -0.59
CBX3P4-202ENST00000540428 A0A0A6YYC8 382 aaPredicted RBP11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 OR5H15A6NDH6 313 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 E5RI56 91 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 E7ENX8 843 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 H0YIG0 161 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 I3L1I5 382 aaPredicted RBP11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 PRAMEF2O60811 474 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 WDPCPO95876 746 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 C8orf89P0DMQ9 161 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 ITGAMP11215 1152 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 PAMP19021 973 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 HRH2P25021 359 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 PTGER4P35408 488 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 CA7P43166 264 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 AVPR1BP47901 424 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 TAP2Q03519 686 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 RBPJQ06330 500 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 RPS6KA1Q15418 735 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 TTLL9Q3SXZ7 439 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 ABHD17BQ5VST6 288 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 FAAH2Q6GMR7 532 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 RPTNQ6XPR3 784 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 BNC2Q6ZN30 1099 aaPredicted RBP11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 CILP2Q8IUL8 1156 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 REXO1L1PQ8IX06 675 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 MCEMP1Q8IX19 187 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 ZNF808Q8N4W9 903 aaPredicted RBP11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 ZNF480Q8WV37 535 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 MAIP1Q8WWC4 291 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 PKP4Q99569 1192 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 EBNA1BP2Q99848 306 aaKnown RBP11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 CHST11Q9NPF2 352 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 INTS10Q9NVR2 710 aaKnown RBP11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 SEC14L3Q9UDX4 400 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 C19orf25Q9UFG5 118 aaPredicted RBP11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 PCYOX1Q9UHG3 505 aa11.38□□□□□ -0.59
CBX3P4-202ENST00000540428 TSR3Q9UJK0 312 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms