RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CPNE9Q8IYJ1 553 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 EID3Q8N140 333 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 TMEM86AQ8N2M4 240 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 NPWQ8N729 165 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 GLB1L3Q8NCI6 653 aaPredicted RBP7.45□□□□□ -1.22
CCDC60-204ENST00000539847 B3GALNT2Q8NCR0 500 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 PDZD8Q8NEN9 1154 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 LILRB4Q8NHJ6 448 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 ZFP90Q8TF47 636 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 TADA1Q96BN2 335 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 TUBGCP3Q96CW5 907 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 PHF21BQ96EK2 531 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 ZSWIM3Q96MP5 696 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 ATOH8Q96SQ7 321 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 MBOAT4Q96T53 435 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 SLC39A3Q9BRY0 314 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 FICDQ9BVA6 458 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 DERL2Q9GZP9 239 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 SLIRPQ9GZT3 109 aaKnown RBP7.45□□□□□ -1.22
CCDC60-204ENST00000539847 CXCL16Q9H2A7 254 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 KAT8Q9H7Z6 458 aaKnown RBP7.45□□□□□ -1.22
CCDC60-204ENST00000539847 SIAEQ9HAT2 523 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 CYP4F12Q9HCS2 524 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 MID1IP1Q9NPA3 183 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 POLG2Q9UHN1 485 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 KLF15Q9UIH9 416 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 INTS6Q9UL03 887 aaKnown RBP7.45□□□□□ -1.22
CCDC60-204ENST00000539847 MKLN1Q9UL63 735 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 EIF3LQ9Y262 564 aaKnown RBP7.45□□□□□ -1.22
CCDC60-204ENST00000539847 POLR3KQ9Y2Y1 108 aaPredicted RBP7.45□□□□□ -1.22
CCDC60-204ENST00000539847 GRIP1Q9Y3R0 1128 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 AP1M2Q9Y6Q5 423 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 ZFHX4Q86UP3 3567 aa7.45□□□□□ -1.22
CCDC60-204ENST00000539847 SDK1Q7Z5N4 2213 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 COL4A2P08572 1712 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ANKRD11Q6UB99 2663 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ASPDHA6ND91 283 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 CHURC1-FNTBB4DL54 471 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 E9PQ18 207 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 LOC110117498-PIK3R3F6TDL0 507 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 KMOO15229 486 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 CD3EAPO15446 510 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 SCO2O43819 266 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 SNX2O60749 519 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 RECQL5O94762 991 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 LRIG2O94898 1065 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 EPN2O95208 641 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 KRT75O95678 551 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 B3GALT4O96024 378 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 RPS17P08708 135 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 MTHFD1P11586 935 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 LMO2P25791 158 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 NFKBIAP25963 317 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 VIPR2P41587 438 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 YAP1P46937 504 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 LHX1P48742 406 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 FNTBP49356 437 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 RENBPP51606 427 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 KPNA1P52294 538 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 EPHB3P54753 998 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 TPD52P55327 224 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 WNT3AP56704 352 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 DEFA1P59665 94 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 DEFA3P59666 94 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ARPC4P59998 168 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 SLC35A2P78381 396 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 PCDH1Q08174 1060 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 TWF1Q12792 350 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 SMARCB1Q12824 385 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 KCNAB2Q13303 367 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 GPR17Q13304 367 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 CAPRIN1Q14444 709 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF460Q14592 562 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 POU6F1Q14863 301 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 NPTX1Q15818 432 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ADPRMQ3LIE5 342 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 PAGE3Q5JUK9 113 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 PERM1Q5SV97 790 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 RBM20Q5T481 1227 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 MANEALQ5VSG8 457 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 UBE2UQ5VVX9 321 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ATG9BQ674R7 924 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 CLEC6AQ6EIG7 209 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 MRM1Q6IN84 353 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 LAIR2Q6ISS4 152 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 MRNIPQ6NTE8 343 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 METTL2BQ6P1Q9 378 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 PAQR9Q6ZVX9 377 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 CEP68Q76N32 757 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 NANOGNBQ7Z5D8 188 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 SLC22A16Q86VW1 577 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 TSPYL5Q86VY4 417 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 TMC8Q8IU68 726 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 LYSMD2Q8IV50 215 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ARHGAP12Q8IWW6 846 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 NKAPQ8N5F7 415 aaKnown RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 ATPAF2Q8N5M1 289 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 CAMKK1Q8N5S9 505 aa7.44□□□□□ -1.22
CCDC60-204ENST00000539847 PTGR2Q8N8N7 351 aaPredicted RBP7.44□□□□□ -1.22
CCDC60-204ENST00000539847 SIMC1Q8NDZ2 872 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms