RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 SLC18A2Q05940 514 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 CDC16Q13042 620 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 SETDB1Q15047 1291 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 CEP85LQ5SZL2 805 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 TRABD2AQ86V40 505 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 LCA5Q86VQ0 697 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 TMEM126BQ8IUX1 230 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 SNX31Q8N9S9 440 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 OR8K5Q8NH50 307 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 UBTD2Q8WUN7 234 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 ZCCHC14Q8WYQ9 949 aaKnown RBP12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 FGF11Q92914 225 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 ZFYVE21Q9BQ24 234 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 SELENOSQ9BQE4 189 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 SPRY4Q9C004 299 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 SPNS1Q9H2V7 528 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 STARD5Q9NSY2 213 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 DNAJC11Q9NVH1 559 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 ACSL6Q9UKU0 697 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 EMCNQ9ULC0 261 aa12.18□□□□□ -0.46
TSPAN9-207ENST00000539631 LOC105369274A0A096LPK9 316 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 LOC102723532A0A0G2JNH3 316 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 TEX51A0A1B0GUA7 166 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 FEZF1A0PJY2 475 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 TAF4O00268 1085 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 SMIM24O75264 130 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 SCRG1O75711 98 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 OR2B3O76000 313 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 SIX3O95343 332 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 NTRK1P04629 796 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 EZRP15311 586 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 ALDH18A1P54886 795 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 PCBP4P57723 403 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 VSX2P58304 361 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 NXPE4Q6UWF7 544 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 LRIG3Q6UXM1 1119 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 LRRC70Q7Z2Q7 622 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 TIPARPQ7Z3E1 657 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 TMPRSS11BQ86T26 416 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 SRRM1Q8IYB3 904 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 GPR135Q8IZ08 494 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 OR4N4Q8N0Y3 316 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 PTGR2Q8N8N7 351 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 ABHD11Q8NFV4 315 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 OR4K1Q8NGD4 311 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 SNIP1Q8TAD8 396 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 PHF21BQ96EK2 531 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 NAF1Q96HR8 494 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 ULBP3Q9BZM4 244 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 C12orf65Q9H3J6 166 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 PELI2Q9HAT8 420 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 IRAK4Q9NWZ3 460 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 OPTCQ9UBM4 332 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 TMCO1Q9UM00 188 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 TMEM184BQ9Y519 407 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 KCNE2Q9Y6J6 123 aa12.17□□□□□ -0.46
TSPAN9-207ENST00000539631 TMEM8BA6NDV4 472 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 H0YGG7 62 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 STMND1H3BQB6 276 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 K7EPI3 171 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 COPEO14579 308 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CLGNO14967 610 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 RGS16O15492 202 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 ZNF749O43361 778 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 LCMT2O60294 686 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 RAD1O60671 282 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 SRPX2O60687 465 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 PRAMEF4O60810 478 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 DLGAP3O95886 979 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 EIF2S1P05198 315 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 C1GALT1C1LP0DN25 315 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 H2AFXP16104 143 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CREB1P16220 341 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 GNAZP19086 355 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 EPORP19235 508 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 VARSP26640 1264 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CD82P27701 267 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CRHR1P34998 444 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CCT5P48643 541 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CCR8P51685 355 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 ARF3P61204 181 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 RELAQ04206 551 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CASP8Q14790 479 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 PCBP2Q15366 365 aaKnown RBP eCLIP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 TGIF1Q15583 401 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 PDK4Q16654 411 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 WASHC2DQ5SRD0 308 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 PRAMEF9Q5VWM5 478 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 SLCO4C1Q6ZQN7 724 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 DTX1Q86Y01 620 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 TEX9Q8N6V9 391 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 ZNF655Q8N720 491 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 KDF1Q8NAX2 398 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 SLC38A9Q8NBW4 561 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 GALNT6Q8NCL4 622 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 ZNF740Q8NDX6 193 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 ZNF285Q96NJ3 590 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 OR2A5Q96R48 311 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CAPS2Q9BXY5 557 aa12.16□□□□□ -0.46
TSPAN9-207ENST00000539631 CENPHQ9H3R5 247 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms