RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 BANF1O75531 89 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 ZGLP1P0C6A0 271 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 TCP1P17987 556 aaKnown RBP21.15■□□□□ 0.98
SCARB1-206ENST00000539320 KLC1Q07866 573 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 DSG2Q14126 1118 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 HKDC1Q2TB90 917 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 PLEKHN1Q494U1 663 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-206ENST00000539320 SPANXN3Q5MJ09 141 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 GARNL3Q5VVW2 1013 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 UGT3A1Q6NUS8 523 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 PCGF5Q86SE9 256 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 ZADH2Q8N4Q0 377 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 OR11G2Q8NGC1 345 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 OR2A5Q96R48 311 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 NDNQ99608 321 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 EBNA1BP2Q99848 306 aaKnown RBP21.15■□□□□ 0.98
SCARB1-206ENST00000539320 CUEDC1Q9NWM3 386 aaPredicted RBP21.15■□□□□ 0.98
SCARB1-206ENST00000539320 C3orf18Q9UK00 162 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 ICE1Q9Y2F5 2266 aa21.15■□□□□ 0.98
SCARB1-206ENST00000539320 IGLV3-12A0A075B6K2 115 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 MAP2K7O14733 419 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 HAT1O14929 419 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 ACPPP15309 386 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 RGS4P49798 205 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 RELAQ04206 551 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 FHL5Q5TD97 284 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 NAT9Q9BTE0 207 aa21.14■□□□□ 0.97
SCARB1-206ENST00000539320 ZBTB20Q9HC78 741 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-206ENST00000539320 CCDC177Q9NQR7 707 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-206ENST00000539320 TXNDC9O14530 226 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 AGFG2O95081 481 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 TBPL1P62380 186 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 SP140Q13342 867 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 BBS9Q3SYG4 887 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 MSS51Q4VC12 460 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 Q6ZS92 163 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 KIAA0408Q6ZU52 694 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 CNTN4Q8IWV2 1026 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 WDR77Q9BQA1 342 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-206ENST00000539320 C14orf105Q9NVL8 296 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 TAS2R13Q9NYV9 303 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 TRPC4Q9UBN4 977 aa21.13■□□□□ 0.97
SCARB1-206ENST00000539320 BLACEA4D250 179 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 TCP11X1B4DZS4 312 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 P2RX6O15547 441 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 C8GP07360 202 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 ANXA5P08758 320 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 TIAL1Q01085 375 aaKnown RBP eCLIP21.12■□□□□ 0.97
SCARB1-206ENST00000539320 VWA2Q5GFL6 755 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 RBM20Q5T481 1227 aaKnown RBP21.12■□□□□ 0.97
SCARB1-206ENST00000539320 AGAP7PQ5VUJ5 663 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 PLD3Q8IV08 490 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 PARP9Q8IXQ6 854 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 MYO1HQ8N1T3 1032 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 ARHGEF39Q8N4T4 335 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 MCOLN3Q8TDD5 553 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 PPP4R1Q8TF05 950 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 SNRNP40Q96DI7 357 aaKnown RBP21.12■□□□□ 0.97
SCARB1-206ENST00000539320 CERS2Q96G23 380 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 AGAP4Q96P64 663 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 LHPPQ9H008 270 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 DRC3Q9H069 523 aa21.12■□□□□ 0.97
SCARB1-206ENST00000539320 FFAR3O14843 346 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 GPR42O15529 346 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 HPP00738 406 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 GABRB3P28472 473 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 SYDE1Q6ZW31 735 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-206ENST00000539320 CUZD1Q86UP6 607 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 CISD2Q8N5K1 135 aaKnown RBP21.11■□□□□ 0.97
SCARB1-206ENST00000539320 AMER3Q8N944 861 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 EEF1AKMT1Q8WVE0 214 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 C8orf44Q96CB5 159 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 C19orf60Q96EN9 201 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 MMABQ96EY8 250 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-206ENST00000539320 CAPZA3Q96KX2 299 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 CCDC138Q96M89 665 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 MESP1Q9BRJ9 268 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 YIPF2Q9BWQ6 316 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 PCBD2Q9H0N5 130 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 SLC17A6Q9P2U8 582 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 ADAMTS6Q9UKP5 1117 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 PDE10AQ9Y233 779 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 PCDHGA10Q9Y5H3 936 aa21.11■□□□□ 0.97
SCARB1-206ENST00000539320 PRRC2CQ9Y520 2896 aaKnown RBP21.11■□□□□ 0.97
SCARB1-206ENST00000539320 H7BY64 318 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 GP1BBP13224 206 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 HRH2P25021 359 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 IVDP26440 423 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 SLC26A3P40879 764 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 CDKN2DP55273 166 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 MRPL49Q13405 166 aaKnown RBP21.1■□□□□ 0.97
SCARB1-206ENST00000539320 MORF4L2Q15014 288 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 HIF1AQ16665 826 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 NDUFA9Q16795 377 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 PAQR3Q6TCH7 311 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 IGFL2Q6UWQ7 119 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 MBOAT1Q6ZNC8 495 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 GALNT7Q86SF2 657 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 IGDCC3Q8IVU1 814 aa21.1■□□□□ 0.97
SCARB1-206ENST00000539320 PALM2Q8IXS6 379 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms