RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 AMZ2Q86W34 360 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 SIDT2Q8NBJ9 832 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 ZDHHC12Q96GR4 267 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 OLFM1Q99784 485 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 NLNQ9BYT8 704 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 OSGEPL1Q9H4B0 414 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 ZNF552Q9H707 407 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 POPDC3Q9HBV1 291 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 ZBTB20Q9HC78 741 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 FGF21Q9NSA1 209 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 SLC23A2Q9UGH3 650 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 NOVA2Q9UNW9 492 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 DNAJC16Q9Y2G8 782 aa12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 KLF2Q9Y5W3 355 aaPredicted RBP12.03□□□□□ -0.48
CLSTN3-208ENST00000538933 ACANP16112 2415 aa12.02□□□□□ -0.48
CLSTN3-208ENST00000538933 A0A087X1B8 175 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 A0A096LPK6 155 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 KLHL33A6NCF5 533 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 PABPN1LA6NDY0 278 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 AGPSO00116 658 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 DIAPH2O60879 1101 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 CPNE3O75131 537 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 POP7O75817 140 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 VIPP01282 170 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 BRAFP15056 766 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 GLRBP48167 497 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 KPNA2P52292 529 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 RRADP55042 308 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 HSPA14Q0VDF9 509 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 ATP1A4Q13733 1029 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 GPR18Q14330 331 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 ZNF460Q14592 562 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 KLC3Q6P597 504 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 TIFABQ6ZNK6 161 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 CFAP206Q8IYR0 622 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 CYP4X1Q8N118 509 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 C4orf33Q8N1A6 199 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 MYO1HQ8N1T3 1032 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 NKAPQ8N5F7 415 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 HM13Q8TCT9 377 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 LKAAEAR1Q8TD35 194 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 ACMSDQ8TDX5 336 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 ASZ1Q8WWH4 475 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 ATP6V1G3Q96LB4 118 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 LRFN5Q96NI6 719 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 MCMBPQ9BTE3 642 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 ILKAPQ9H0C8 392 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 MED4Q9NPJ6 270 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 AGPAT4Q9NRZ5 378 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 EURLQ9NYK6 297 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 TSR3Q9UJK0 312 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 SNX7Q9UNH6 387 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 ACOT9Q9Y305 439 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 DNMT3AQ9Y6K1 912 aaPredicted RBP12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 PCM1Q15154 2024 aa12.02□□□□□ -0.49
CLSTN3-208ENST00000538933 A0A1W2PPM1 405 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 MGAT4DA6NG13 374 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 HMGB1P1B2RPK0 211 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 MEN1O00255 615 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 COPEO14579 308 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 LIN7AO14910 233 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 CHUKO15111 745 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 KCNJ13O60928 360 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 SCRG1O75711 98 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 ALDOAP04075 364 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 C2P06681 752 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 PYGBP11216 843 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 KRT4P19013 534 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 CD9P21926 228 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 RORAP35398 523 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 CCT5P48643 541 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 KRTAP10-9P60411 292 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 IL2P60568 153 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 ACY1Q03154 408 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 CSHL1Q14406 222 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 MYBPC3Q14896 1274 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 LRRC8EQ6NSJ5 796 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 IRGCQ6NXR0 463 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 ABRAXAS1Q6UWZ7 409 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 NAPRTQ6XQN6 538 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 TRABD2AQ86V40 505 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 CEP97Q8IW35 865 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 CPNE9Q8IYJ1 553 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 DSELQ8IZU8 1212 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 D2HGDHQ8N465 521 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 ACVR1CQ8NER5 493 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 OR2L2Q8NH16 312 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 CD200R1Q8TD46 325 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 ITLN2Q8WWU7 325 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 RELTQ969Z4 430 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 ZNF501Q96CX3 271 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 SCYL1Q96KG9 808 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 TIMM29Q9BSF4 260 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 KCNK9Q9NPC2 374 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 LATS2Q9NRM7 1088 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 KLC4Q9NSK0 619 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 DHRS7Q9Y394 339 aa12.01□□□□□ -0.49
CLSTN3-208ENST00000538933 NUP210LQ5VU65 1888 aa12□□□□□ -0.49
CLSTN3-208ENST00000538933 A0A1B0GUH1 482 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms