RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 ACTL8Q9H568 366 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 ARL15Q9NXU5 204 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 DHCR7Q9UBM7 475 aaKnown RBP13.1□□□□□ -0.31
CD9-208ENST00000538834 TCFL5Q9UL49 500 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 CNTRLQ7Z7A1 2325 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 SPTA1P02549 2419 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 IGLV3-12A0A075B6K2 115 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 A0A0J9YVX5 310 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 A0A1B0GX78 115 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 H7BY64 318 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 HAT1O14929 419 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 TAPBPO15533 448 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 ALBP02768 609 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 ABHD2P08910 425 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 HIST1H2AGP0C0S8 130 aaPredicted RBP13.09□□□□□ -0.31
CD9-208ENST00000538834 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 HIST1H2ADP20671 130 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 GCAP28676 217 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 GMPRP36959 345 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 HNMTP50135 292 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 SNRPNP63162 240 aaKnown RBP13.09□□□□□ -0.31
CD9-208ENST00000538834 GRM7Q14831 915 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 NCF4Q15080 339 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 TGFBIQ15582 683 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 FAM214AQ32MH5 1076 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 PTCHD3Q3KNS1 767 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 CCDC91Q7Z6B0 441 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 CTAGE3PQ8IX95 158 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 IFT20Q8IY31 132 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 CENPLQ8N0S6 344 aaPredicted RBP13.09□□□□□ -0.31
CD9-208ENST00000538834 IFT81Q8WYA0 676 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 THAP11Q96EK4 314 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 HIST1H2AHQ96KK5 128 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 PRAP1Q96NZ9 151 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 GPR78Q96P69 363 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 ATOH8Q96SQ7 321 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 HIST1H2AJQ99878 128 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 HAUS8Q9BT25 410 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 H2AFJQ9BTM1 129 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 TRIM54Q9BYV2 358 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 IGSF5Q9NSI5 407 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 CUTCQ9NTM9 273 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 COPG2Q9UBF2 871 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 NFU1Q9UMS0 254 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
CD9-208ENST00000538834 CCDC189A1A4V9 331 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 NPEPPSL1A6NEC2 478 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 VSTM2BA6NLU5 285 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 FOXS1O43638 330 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 LCMT2O60294 686 aaKnown RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 C1QL1O75973 258 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 ALDOAP04075 364 aaKnown RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 FAM153BP0C7A2 387 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 MTHFD2P13995 350 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 SAT1P21673 171 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 TNFRSF8P28908 595 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 CRABP2P29373 138 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 PHBP35232 272 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 VSX2P58304 361 aaPredicted RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 RPS18P62269 152 aaKnown RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 DCDP81605 110 aaKnown RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 NFKB2Q00653 900 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 PCDH1Q08174 1060 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 IL10RAQ13651 578 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 SLMAPQ14BN4 828 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 OR4D1Q15615 310 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 FAM153CQ494X1 144 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 NKAIN1Q4KMZ8 207 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 ATP1A1-AS1Q5TC04 95 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 GARNL3Q5VVW2 1013 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 CAPN13Q6MZZ7 669 aaPredicted RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 OVCH1Q7RTY7 1134 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 CMC1Q7Z7K0 106 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 APLFQ8IW19 511 aaPredicted RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 TMEM151BQ8IW70 566 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 ENDOVQ8N8Q3 282 aaKnown RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 PDPRQ8NCN5 879 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 DCAKDQ8WVC6 231 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 N4BP2L2Q92802 583 aaPredicted RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 EXTL1Q92935 676 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 FKBP10Q96AY3 582 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 PYCR2Q96C36 320 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 MVB12AQ96EY5 273 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 NDC1Q9BTX1 674 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 STARD5Q9NSY2 213 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 UTP6Q9NYH9 597 aaKnown RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 TXNDC16Q9P2K2 825 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 CTNNAL1Q9UBT7 734 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 TUBD1Q9UJT1 453 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 ZNF180Q9UJW8 692 aa13.08□□□□□ -0.32
CD9-208ENST00000538834 PTBP2Q9UKA9 531 aaKnown RBP13.08□□□□□ -0.32
CD9-208ENST00000538834 FASNP49327 2511 aaKnown RBP13.07□□□□□ -0.32
CD9-208ENST00000538834 HYKKA2RU49 373 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 P2RX6O15547 441 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 C2P06681 752 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 ANXA5P08758 320 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 CD63P08962 238 aa13.07□□□□□ -0.32
CD9-208ENST00000538834 MYBL2P10244 700 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms