RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 MFSD4BQ5TF39 518 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 LRRC8BQ6P9F7 803 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 SUSD1Q6UWL2 747 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 OTOAQ7RTW8 1153 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 HMGCLL1Q8TB92 370 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 MVB12AQ96EY5 273 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 IMMP1LQ96LU5 166 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 FOPNLQ96NB1 174 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 PANX3Q96QZ0 392 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 TUBB6Q9BUF5 446 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 HES7Q9BYE0 225 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 TGIF2Q9GZN2 237 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 DRC3Q9H069 523 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 MRPS30Q9NP92 439 aaKnown RBP13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 GNPTGQ9UJJ9 305 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 MEMO1Q9Y316 297 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 DUSP10Q9Y6W6 482 aa13.27□□□□□ -0.29
SMARCA4-206ENST00000538456 NPIPA5E9PKD4 350 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 TTI1O43156 1089 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 FOXS1O43638 330 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 STATHP02808 62 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 ADRA1DP25100 572 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 RPA3P35244 121 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 CCNFP41002 786 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 EMP3P54852 163 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 ALDH6A1Q02252 535 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 ACVR1Q04771 509 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 NAA25Q14CX7 972 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 BTBD16Q32M84 506 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 TMEM205Q6UW68 189 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 SPNS3Q6ZMD2 512 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 C3P1Q6ZMU1 363 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 LANCL3Q6ZV70 420 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 SPPL2CQ8IUH8 684 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 METTL21AQ8WXB1 218 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 RERGQ96A58 199 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 FAM136AQ96C01 138 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 MRFAP1L1Q96HT8 127 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 GPR137Q96N19 417 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 SIGLEC12Q96PQ1 595 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 PLCD4Q9BRC7 762 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 VN1R1Q9GZP7 353 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 GPAMQ9HCL2 828 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 SPATA7Q9P0W8 599 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 NPIPA1Q9UND3 350 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 ZNF835Q9Y2P0 537 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 TCAF1Q9Y4C2 921 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 MRFAP1Q9Y605 127 aa13.26□□□□□ -0.29
SMARCA4-206ENST00000538456 SPG11Q96JI7 2443 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 SCN3AQ9NY46 2000 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 IGKV1-8A0A0C4DH67 115 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 TCRBV7S2A1N4TA0A589 114 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 E7EVH7 732 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 CD3EAPO15446 510 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 P2RX6O15547 441 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 ABOP16442 354 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 CAPN3P20807 821 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 TTPAP49638 278 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 EIF3BP55884 814 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 SNRPNP63162 240 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 HSF1Q00613 529 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 TUBA3CQ13748 450 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 MINDY4Q4G0A6 757 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 ACER2Q5QJU3 275 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 TUBA3EQ6PEY2 450 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 PAQR7Q86WK9 346 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 SHISA5Q8N114 240 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 TC2NQ8N9U0 490 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 PPHLN1Q8NEY8 458 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 SLC35B2Q8TB61 432 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 AGAP11Q8TF27 550 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 ATG4AQ8WYN0 398 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 C14orf79Q96F83 325 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 P2RY12Q9H244 342 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 ETNK1Q9HBU6 452 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 TAC3Q9UHF0 121 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 PCYOX1Q9UHG3 505 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 RIMKLBQ9ULI2 386 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 NEU2Q9Y3R4 380 aa13.25□□□□□ -0.29
SMARCA4-206ENST00000538456 NAV3Q8IVL0 2385 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 OR2W5A6NFC9 320 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 ERI2A8K979 691 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 KPNA5O15131 536 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 PHF2O75151 1096 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 MLYCDO95822 493 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 IFNB1P01574 187 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 EEF1DP29692 281 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 OR1C1Q15619 314 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 KRTCAP3Q53RY4 240 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 GARNL3Q5VVW2 1013 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 SPINK14Q6IE38 97 aa13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 MEX3BQ6ZN04 569 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 Q6ZPB1 254 aaPredicted RBP13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 CPEB2Q7Z5Q1 589 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-206ENST00000538456 ADCK2Q7Z695 626 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms