RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 LPAR3Q9UBY5 353 aa8.84□□□□□ -0.99
CPSF7-217ENST00000537162 WIF1Q9Y5W5 379 aa8.84□□□□□ -0.99
CPSF7-217ENST00000537162 NCKAP5O14513 1909 aa8.84□□□□□ -1
CPSF7-217ENST00000537162 EEF1E1-BLOC1S5C9J1V9 151 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 FAM47E-STBD1D6RA91 191 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 DDX3XO00571 662 aaKnown RBP eCLIP8.83□□□□□ -11e-6■■■■□ 20.9
CPSF7-217ENST00000537162 EEF1E1O43324 174 aaKnown RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 BUD23O43709 281 aaKnown RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 EIF2S1P05198 315 aaKnown RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 LOXP28300 417 aaPredicted RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 TRHRP34981 398 aaPredicted RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 CYLC1P35663 651 aaPredicted RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 ACVR1BP36896 505 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 GSCP56915 257 aaPredicted RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 FMO1Q01740 532 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 NOMO1Q15155 1222 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 PPP2R5EQ16537 467 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 ZC3H12BQ5HYM0 836 aaKnown RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 VASNQ6EMK4 673 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 ISM2Q6H9L7 571 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 GBP6Q6ZN66 633 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 PLEKHM3Q6ZWE6 761 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 TAX1BP1Q86VP1 789 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 LINC01555Q8NAE3 123 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 MMABQ96EY8 250 aaPredicted RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 PCDHB18PQ96TA0 734 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 ADGRE3Q9BY15 652 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 MKKSQ9NPJ1 570 aaPredicted RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 TDRKHQ9Y2W6 561 aaKnown RBP8.83□□□□□ -1
CPSF7-217ENST00000537162 TESMINQ9Y4I5 508 aa8.83□□□□□ -1
CPSF7-217ENST00000537162 A0A096LNT2 108 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 A0A0J9YVX5 310 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 G3V3Y1 287 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 IFRD1O00458 451 aaPredicted RBP8.82□□□□□ -1
CPSF7-217ENST00000537162 AQP7O14520 342 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 CASKO14936 926 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 FOXS1O43638 330 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 CES1P23141 567 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 MAGEA5P43359 124 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 ZNF165P49910 485 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 MLF1P58340 268 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 PLGLB1Q02325 96 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 PTPRCAPQ14761 206 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 KIR2DS3Q14952 304 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 EXT1Q16394 746 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 EXOC3L4Q17RC7 722 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 WLSQ5T9L3 541 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 PAPD4Q6PIY7 484 aaKnown RBP8.82□□□□□ -1
CPSF7-217ENST00000537162 MICALCLQ6ZW33 695 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 OTOAQ7RTW8 1153 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 C3orf56Q8N813 242 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 METTL21AQ8WXB1 218 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 ISL2Q96A47 359 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 TTTY12Q9BZ98 90 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 XPO4Q9C0E2 1151 aaKnown RBP8.82□□□□□ -1
CPSF7-217ENST00000537162 C12orf65Q9H3J6 166 aaKnown RBP8.82□□□□□ -1
CPSF7-217ENST00000537162 GOLPH3LQ9H4A5 285 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 ASB8Q9H765 288 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 GALNT8Q9NY28 637 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 OR6C2Q9NZP2 312 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 ADAM22Q9P0K1 906 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 ZNF629Q9UEG4 869 aaPredicted RBP8.82□□□□□ -1
CPSF7-217ENST00000537162 CIDEBQ9UHD4 219 aa8.82□□□□□ -1
CPSF7-217ENST00000537162 FREM1Q5H8C1 2179 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 A0A0A6YYC8 382 aaPredicted RBP8.81□□□□□ -1
CPSF7-217ENST00000537162 FEZF1A0PJY2 475 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 I3L1I5 382 aaPredicted RBP8.81□□□□□ -1
CPSF7-217ENST00000537162 MATN3O15232 486 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 CTIFO43310 598 aaKnown RBP8.81□□□□□ -1
CPSF7-217ENST00000537162 ADAM11O75078 769 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 TPH1P17752 444 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 IGFBP5P24593 272 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 CD151P48509 253 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 PCSK7Q16549 785 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 MAN2A1Q16706 1144 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 MUM1Q2TAK8 710 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 PRTGQ2VWP7 1150 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 MFSD4BQ5TF39 518 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 KLHL10Q6JEL2 608 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 MAATS1Q7Z4T9 603 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 POLNQ7Z5Q5 900 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 TMEM251Q8N6I4 163 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 OR2M7Q8NG81 312 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 ELP5Q8TE02 316 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 TMEM171Q8WVE6 324 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 CABS1Q96KC9 395 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 CSPG4P5Q96PW8 444 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 RBM24Q9BX46 236 aaKnown RBP8.81□□□□□ -1
CPSF7-217ENST00000537162 SPTLC3Q9NUV7 552 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.81□□□□□ -1
CPSF7-217ENST00000537162 RCOR1Q9UKL0 485 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 DRG1Q9Y295 367 aaKnown RBP8.81□□□□□ -1
CPSF7-217ENST00000537162 CMYA5Q8N3K9 4069 aa8.81□□□□□ -1
CPSF7-217ENST00000537162 GLYATL1P3A0A0U1RQE8 302 aa8.8□□□□□ -1
CPSF7-217ENST00000537162 FAM237AA0A1B0GTK4 181 aa8.8□□□□□ -1
CPSF7-217ENST00000537162 KLHL33A6NCF5 533 aa8.8□□□□□ -1
CPSF7-217ENST00000537162 SOWAHDA6NJG2 315 aa8.8□□□□□ -1
CPSF7-217ENST00000537162 MFSD11O43934 449 aa8.8□□□□□ -1
CPSF7-217ENST00000537162 SRPX2O60687 465 aaPredicted RBP8.8□□□□□ -1
CPSF7-217ENST00000537162 GLSO94925 669 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms