RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FKBP3Q00688 224 aaKnown RBP3.68□□□□□ -1.82
CCDC7-208ENST00000537047 TRIM29Q14134 588 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 CCDC30Q5VVM6 783 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 RNLSQ5VYX0 342 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 CCBE1Q6UXH8 406 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-208ENST00000537047 BAIAP2L2Q6UXY1 529 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 OR10G7Q8NGN6 311 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 LPGAT1Q92604 370 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 HDAC2Q92769 488 aaKnown RBP3.68□□□□□ -1.82
CCDC7-208ENST00000537047 PSMB7Q99436 277 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 ZHX3Q9H4I2 956 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 Q9H8V8 135 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 GON4LQ3T8J9 2241 aa3.68□□□□□ -1.82
CCDC7-208ENST00000537047 GPR75-ASB3A0A0A6YYF3 556 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 IGHV3-20A0A0C4DH32 117 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 AP3D1O14617 1153 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 PCP11498 1178 aaKnown RBP3.67□□□□□ -1.82
CCDC7-208ENST00000537047 NDUFV3P56181 108 aaKnown RBP3.67□□□□□ -1.82
CCDC7-208ENST00000537047 KLC1Q07866 573 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 DDX10Q13206 875 aaKnown RBP3.67□□□□□ -1.82
CCDC7-208ENST00000537047 EIF4EBP2Q13542 120 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-208ENST00000537047 VEZF1Q14119 521 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 RNF130Q86XS8 419 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 GUF1Q8N442 669 aaKnown RBP3.67□□□□□ -1.82
CCDC7-208ENST00000537047 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-208ENST00000537047 SLAMF9Q96A28 289 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 MPP4Q96JB8 637 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 SERAC1Q96JX3 654 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 FAM71F1Q96KD3 344 aaPredicted RBP3.67□□□□□ -1.82
CCDC7-208ENST00000537047 OSGEPL1Q9H4B0 414 aa3.67□□□□□ -1.82
CCDC7-208ENST00000537047 PSMB10P40306 273 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 NRIP1P48552 1158 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 VAMP7P51809 220 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 ARF3P61204 181 aaPredicted RBP3.66□□□□□ -1.82
CCDC7-208ENST00000537047 ARF1P84077 181 aaKnown RBP3.66□□□□□ -1.82
CCDC7-208ENST00000537047 MFSD12Q6NUT3 480 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 FCRLAQ7L513 359 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 MAATS1Q7Z4T9 603 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 PIK3R3Q92569 461 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 NXNL1Q96CM4 212 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 CCDC34Q96HJ3 373 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 POLR3GLQ9BT43 218 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 MTMR12Q9C0I1 747 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 DNAI2Q9GZS0 605 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 ZMYND12Q9H0C1 365 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 PSD3Q9NYI0 1048 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 RNF150Q9ULK6 438 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 SELENOKQ9Y6D0 94 aa3.66□□□□□ -1.82
CCDC7-208ENST00000537047 O00370 1275 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 SURF4O15260 269 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 OGTO15294 1046 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 KRT33AO76009 404 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 FDPSP14324 419 aaKnown RBP3.65□□□□□ -1.83
CCDC7-208ENST00000537047 DCDC1P59894 354 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 PSMC6P62333 389 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 TRAP1Q12931 704 aaKnown RBP3.65□□□□□ -1.83
CCDC7-208ENST00000537047 IL17RELQ6ZVW7 336 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 TEX19Q8NA77 164 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 MRAPQ8TCY5 172 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 EGLN3Q9H6Z9 239 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 NLGN3Q9NZ94 848 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 PRDM4Q9UKN5 801 aa3.65□□□□□ -1.83
CCDC7-208ENST00000537047 ZNF215Q9UL58 517 aaPredicted RBP3.65□□□□□ -1.83
CCDC7-208ENST00000537047 AGAP14A8MT82 685 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 SGCGQ13326 291 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 ALDH1L2Q3SY69 923 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 FAM182AQ5T1J6 154 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 OR4C11Q6IEV9 310 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 FAM89BQ8N5H3 189 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 POC5Q8NA72 575 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 OR4Q3Q8NH05 313 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 SPPL2AQ8TCT8 520 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 SPACA9Q96E40 222 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-208ENST00000537047 TIGD1Q96MW7 591 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 MAK16Q9BXY0 300 aaKnown RBP3.64□□□□□ -1.83
CCDC7-208ENST00000537047 YTHDF1Q9BYJ9 559 aaKnown RBP3.64□□□□□ -1.83
CCDC7-208ENST00000537047 GOLPH3LQ9H4A5 285 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 ZNF581Q9P0T4 197 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 ABCD2Q9UBJ2 740 aa3.64□□□□□ -1.83
CCDC7-208ENST00000537047 RALGAPA1Q6GYQ0 2036 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 F5H0A9 414 aaPredicted RBP3.63□□□□□ -1.83
CCDC7-208ENST00000537047 ERAL1O75616 437 aaKnown RBP3.63□□□□□ -1.83
CCDC7-208ENST00000537047 GJB3O75712 270 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 BAG3O95817 575 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 RENP00797 406 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 IRF2P14316 349 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 MYOGP15173 224 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 GCH1P30793 250 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 PRKG2Q13237 762 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 LEMD1Q68G75 181 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 OR4A47Q6IF82 309 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 LINC00346Q8IVM7 164 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 CSNK1G2-AS1Q8NCQ2 148 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 PI4K2AQ9BTU6 479 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 ZNF69Q9UC07 566 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 IKZF3Q9UKT9 509 aa3.63□□□□□ -1.83
CCDC7-208ENST00000537047 MYH14Q7Z406 1995 aaKnown RBP3.62□□□□□ -1.83
CCDC7-208ENST00000537047 A0A1W2PPK0 400 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 MTMR11A4FU01 709 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms