RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 TBPL1P62380 186 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 YBX1P67809 324 aaKnown RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 PGS1Q32NB8 556 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 TANGO2Q6ICL3 276 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PDZD3Q86UT5 571 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 DCUN1D3Q8IWE4 304 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 MSRB3Q8IXL7 192 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 CHTF18Q8WVB6 975 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 FIG4Q92562 907 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 OR4K3Q96R72 315 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 ADI1Q9BV57 179 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PITHD1Q9GZP4 211 aaPredicted RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 DCAF13Q9NV06 445 aaKnown RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 MSRAQ9UJ68 235 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 SAMD4AQ9UPU9 718 aaKnown RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 WBP11Q9Y2W2 641 aaKnown RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 OTOL1A6NHN0 477 aaPredicted RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 ACOX3O15254 700 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 CD22P20273 847 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 CXCR2P25025 360 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PDHA2P29803 388 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 TNFRSF4P43489 277 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 MYBPC1Q00872 1141 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 ITPRIPL2Q3MIP1 535 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 KCTD21Q4G0X4 260 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 RNF220Q5VTB9 566 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PNCKQ6P2M8 343 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 LCTLQ6UWM7 567 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 LRRTM4Q86VH4 590 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 ADHFE1Q8IWW8 467 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 KRT78Q8N1N4 520 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 OXR1Q8N573 874 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 DHRSXQ8N5I4 330 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 CLHC1Q8NHS4 586 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 SLC5A11Q8WWX8 675 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 RMND5BQ96G75 393 aaPredicted RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 PHF12Q96QT6 1004 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 PANX1Q96RD7 426 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 SEPHS2Q99611 448 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 TRIM8Q9BZR9 551 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 RSPH9Q9H1X1 276 aaPredicted RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 CLK4Q9HAZ1 481 aaKnown RBP13.12□□□□□ -0.31
SMG6-203ENST00000536871 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 GULP1Q9UBP9 304 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 LIMD1Q9UGP4 676 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 COQ6Q9Y2Z9 468 aa13.12□□□□□ -0.31
SMG6-203ENST00000536871 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 ALPK3Q96L96 1907 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 ARHGAP10A1A4S6 786 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 GRXCR1A8MXD5 290 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 MAGEB17A8MXT2 336 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 SCAMP2O15127 329 aaKnown RBP13.11□□□□□ -0.31
SMG6-203ENST00000536871 MAP3K13O43283 966 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 SMIM18P0DKX4 95 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 NPPBP16860 134 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 ZNF8P17098 575 aaPredicted RBP13.11□□□□□ -0.31
SMG6-203ENST00000536871 TACR1P25103 407 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 TIA1P31483 386 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMG6-203ENST00000536871 CNTN1Q12860 1018 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 CAMK2GQ13555 558 aaPredicted RBP13.11□□□□□ -0.31
SMG6-203ENST00000536871 APOFQ13790 326 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 SLC36A3Q495N2 470 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 ATAT1Q5SQI0 421 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 PIP5KL1Q5T9C9 394 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 BORAQ6PGQ7 559 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 GCNT7Q6ZNI0 430 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 TMPRSS11BQ86T26 416 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 ZDHHC13Q8IUH4 622 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 EPHX4Q8IUS5 362 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 NATD1Q8N6N6 113 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 HUS1BQ8NHY5 278 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 ZFP28Q8NHY6 868 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 TBC1D20Q96BZ9 403 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 MTERF3Q96E29 417 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 BHLHE41Q9C0J9 482 aaPredicted RBP13.11□□□□□ -0.31
SMG6-203ENST00000536871 OR52A5Q9H2C5 316 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 AHSPQ9NZD4 102 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 PCDH10Q9P2E7 1040 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 RPS6KA6Q9UK32 745 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 ACSL5Q9ULC5 683 aa13.11□□□□□ -0.31
SMG6-203ENST00000536871 H3BNH8 94 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 FPGTO14772 594 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 KMOO15229 486 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 CREG1O75629 220 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ANXA4P09525 319 aaPredicted RBP13.1□□□□□ -0.31
SMG6-203ENST00000536871 PCNAP12004 261 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ZNF23P17027 643 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 GPX2P18283 190 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 PTPN6P29350 595 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 CAPGP40121 348 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 GZMMP51124 257 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 PHC1P78364 1004 aa13.1□□□□□ -0.31
SMG6-203ENST00000536871 TAP2Q03519 686 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms