RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 SIDT2Q8NBJ9 832 aaKnown RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 OR10Q1Q8NGQ4 319 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GPR152Q8TDT2 470 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 EEF1AKMT1Q8WVE0 214 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 RNF34Q969K3 372 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 KIAA1143Q96AT1 154 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 TESCQ96BS2 214 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 LINGO1Q96FE5 620 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ZC3HAV1LQ96H79 300 aaKnown RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 MAP6Q96JE9 813 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 OPALINQ96PE5 141 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 VPS35Q96QK1 796 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 OR5M11Q96RB7 305 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 OR52E6Q96RD3 313 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 KCNS3Q9BQ31 491 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SOSTQ9BQB4 213 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CHST8Q9H2A9 424 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 LRTM1Q9HBL6 345 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 HHATLQ9HCP6 504 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 TXNRD2Q9NNW7 524 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 FZD3Q9NPG1 666 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 RPRD1BQ9NQG5 326 aaKnown RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 AASDHPPTQ9NRN7 309 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 TMLHEQ9NVH6 421 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 GPRC5BQ9NZH0 403 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CNOT2Q9NZN8 540 aaKnown RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 CD274Q9NZQ7 290 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 RBPJLQ9UBG7 517 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 RPS6KA6Q9UK32 745 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 ZNF490Q9ULM2 529 aaPredicted RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SNX7Q9UNH6 387 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 FAM50BQ9Y247 325 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 DHRS7Q9Y394 339 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 SAMHD1Q9Y3Z3 626 aaKnown RBP6.72□□□□□ -1.33
CPSF7-215ENST00000536145 IPPQ9Y573 584 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 PCDHGB3Q9Y5G1 929 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 COMMD10Q9Y6G5 202 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 AP1M2Q9Y6Q5 423 aa6.72□□□□□ -1.33
CPSF7-215ENST00000536145 NLRC5Q86WI3 1866 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 KCNE1BA0A087WTH5 132 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 LOC100506127A0A0U1RQW1 187 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 UBA6A0AVT1 1052 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 SERTM1A2A2V5 107 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 NCF1BA6NI72 391 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 RRN3P2A6NIE6 340 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 NCF1CA8MVU1 366 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 H3BRB1 525 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 TRIM77I1YAP6 450 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 GFRA2O00451 464 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PITPNM1O00562 1244 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PRAMEF11O60813 436 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 NDUFS3O75489 264 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 DIRAS1O95057 198 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 LGI1O95970 557 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 B3GALT4O96024 378 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PRLP01236 227 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ESR1P03372 595 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ITGB1P05556 798 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 CSF3P09919 207 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PRPS2P11908 318 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ODC1P11926 461 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PIPP12273 146 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ACPPP15309 386 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PCSK2P16519 638 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 POLR2CP19387 275 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 CSTF2P33240 577 aaKnown RBP eCLIP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 S100A3P33764 101 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 SOX6P35712 828 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 RPS19P39019 145 aaKnown RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ARL1P40616 181 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 KIR2DL3P43628 341 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 CDKN1CP49918 316 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 KCNQ1P51787 676 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 CLCN7P51798 805 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ARHGDIAP52565 204 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 IL2P60568 153 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 RPS14P62263 151 aaKnown RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 KCNJ10P78508 379 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 TSPY1Q01534 308 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 RHAGQ02094 409 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 SERINC3Q13530 473 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 TAF1AQ15573 450 aaPredicted RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 TSTQ16762 297 aaKnown RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 TIMM50Q3ZCQ8 353 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 C5orf22Q49AR2 442 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ALFQ53S48 1182 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 ZMAT1Q5H9K5 638 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 SLC35F1Q5T1Q4 408 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PRAMEF18Q5VWM3 479 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 RNLSQ5VYX0 342 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 METTL2BQ6P1Q9 378 aaKnown RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 CREB3L2Q70SY1 520 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 MILR1Q7Z6M3 343 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 VTCN1Q7Z7D3 282 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 DDX53Q86TM3 631 aaKnown RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 NLRP8Q86W28 1048 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 APOBEC3FQ8IUX4 373 aaKnown RBP6.71□□□□□ -1.34
CPSF7-215ENST00000536145 P3H2Q8IVL5 708 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 MICALL2Q8IY33 904 aa6.71□□□□□ -1.34
CPSF7-215ENST00000536145 PIANPQ8IYJ0 282 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms