RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	TRIM42	Q8IWZ5	723 aa		13.62	□□□□□ -0.23
POLE-208	ENST00000535934	ABHD17A	Q96GS6	310 aa		13.62	□□□□□ -0.23
POLE-208	ENST00000535934	OR2A14	Q96R47	310 aa		13.62	□□□□□ -0.23
POLE-208	ENST00000535934	ECSIT	Q9BQ95	431 aa		13.62	□□□□□ -0.23
POLE-208	ENST00000535934	TRIM55	Q9BYV6	548 aa		13.62	□□□□□ -0.23
POLE-208	ENST00000535934	FAM117A	Q9C073	453 aa		13.62	□□□□□ -0.23
POLE-208	ENST00000535934	EIF2B3	Q9NR50	452 aa	Known RBP	13.62	□□□□□ -0.23
POLE-208	ENST00000535934	KCND3	Q9UK17	655 aa		13.62	□□□□□ -0.23
POLE-208	ENST00000535934	PAIP2B	Q9ULR5	123 aa	Known RBP	13.62	□□□□□ -0.23
POLE-208	ENST00000535934	SNRNP200	O75643	2136 aa	Known RBP	13.61	□□□□□ -0.23
POLE-208	ENST00000535934	TMEM150C	B9EJG8	249 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	MATN2	O00339	956 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	GPC4	O75487	556 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	MT-ND3	P03897	115 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	WDR4	P57081	412 aa	Known RBP	13.61	□□□□□ -0.23
POLE-208	ENST00000535934	PRAME	P78395	509 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	HSPA14	Q0VDF9	509 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	FASTKD1	Q53R41	847 aa	Known RBP	13.61	□□□□□ -0.23
POLE-208	ENST00000535934	ACSBG2	Q5FVE4	666 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	TMTC4	Q5T4D3	741 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	LYPLAL1	Q5VWZ2	237 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	SPESP1	Q6UW49	350 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	FAM47E	Q6ZV65	393 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	CENPU	Q71F23	418 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	GSTA5	Q7RTV2	222 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	FAM20C	Q8IXL6	584 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	TBC1D21	Q8IYX1	336 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	OR5K2	Q8NHB8	316 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	PEX13	Q92968	403 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.61	□□□□□ -0.23	1e-6	■■■■□ 20.6
POLE-208	ENST00000535934	MFSD3	Q96ES6	412 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	PTCD3	Q96EY7	689 aa	Known RBP	13.61	□□□□□ -0.23
POLE-208	ENST00000535934	CHST8	Q9H2A9	424 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	NINJ2	Q9NZG7	142 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	TUBD1	Q9UJT1	453 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	TDRKH	Q9Y2W6	561 aa	Known RBP	13.61	□□□□□ -0.23
POLE-208	ENST00000535934	PCDHB3	Q9Y5E6	796 aa		13.61	□□□□□ -0.23
POLE-208	ENST00000535934	SPEN	Q96T58	3664 aa	Known RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934		A0A1B0GVG6	124 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	ARHGAP10	A1A4S6	786 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	CDC14C	A4D256	554 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	C2orf74	A8MZ97	194 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	C21orf140	B9A014	251 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	MEN1	O00255	615 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	QSOX1	O00391	747 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	TM9SF1	O15321	606 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	CD3EAP	O15446	510 aa	Known RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	CPNE3	O75131	537 aa	Known RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	AVIL	O75366	819 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	CAPN1	P07384	714 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	CHRM5	P08912	532 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	ESRRA	P11474	423 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	UGT2B7	P16662	529 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	MGAT1	P26572	445 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	PEBP1	P30086	187 aa	Known RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	RORA	P35398	523 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	GABRA4	P48169	554 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	IL10RA	Q13651	578 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	COLEC12	Q5KU26	742 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	SPATA24	Q86W54	205 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	CROCCP3	Q8IVE0	287 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	SLC22A15	Q8IZD6	547 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	PPHLN1	Q8NEY8	458 aa	Known RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	OR8K5	Q8NH50	307 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	MR1	Q95460	341 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	TRIM56	Q9BRZ2	755 aa	Known RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	MENT	Q9BUN1	341 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	P2RY12	Q9H244	342 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	VPS11	Q9H270	941 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	LATS2	Q9NRM7	1088 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	SYBU	Q9NX95	663 aa		13.6	□□□□□ -0.23
POLE-208	ENST00000535934	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.6	□□□□□ -0.23
POLE-208	ENST00000535934	USP9X	Q93008	2570 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-208	ENST00000535934		H3BMH7	237 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	GOLGA8T	H3BQL2	631 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	KRT36	O76013	467 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	CBX6	O95503	412 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	MSL3P1	P0C860	447 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	AOAH	P28039	575 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	VPS41	P49754	854 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	MED21	Q13503	144 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	GRB7	Q14451	532 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	SYTL3	Q4VX76	610 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	C1QTNF12	Q5T7M4	302 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	ANKRD22	Q5VYY1	191 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	B3GNT6	Q6ZMB0	384 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	MYLK4	Q86YV6	388 aa	Predicted RBP	13.59	□□□□□ -0.23
POLE-208	ENST00000535934	SPNS2	Q8IVW8	549 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	DSEL	Q8IZU8	1212 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	LINC01555	Q8NAE3	123 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	NRG4	Q8WWG1	115 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	KIFC1	Q9BW19	673 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	GPR87	Q9BY21	358 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	IL22	Q9GZX6	179 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	CATSPERZ	Q9NTU4	200 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	BFAR	Q9NZS9	450 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	FARSA	Q9Y285	508 aa	Known RBP	13.59	□□□□□ -0.23
POLE-208	ENST00000535934	FER1L5	A0AVI2	2057 aa		13.59	□□□□□ -0.23
POLE-208	ENST00000535934	EXOC1L	A0A1B0GW35	172 aa		13.58	□□□□□ -0.23
POLE-208	ENST00000535934	KRT87P	A6NCN2	255 aa		13.58	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms