RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 CCDC184Q52MB2 194 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 PRR30Q53SZ7 412 aaPredicted RBP3.37□□□□□ -1.87
VBP1-203ENST00000535916 IGSF11Q5DX21 431 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 FAM182AQ5T1J6 154 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 RAPH1Q70E73 1250 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 BRINP3Q76B58 766 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 NUP54Q7Z3B4 507 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 KBTBD6Q86V97 674 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 ZNF595Q8IYB9 648 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 OR10Q1Q8NGQ4 319 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 PTPMT1Q8WUK0 201 aaPredicted RBP3.37□□□□□ -1.87
VBP1-203ENST00000535916 HDAC2Q92769 488 aaKnown RBP3.37□□□□□ -1.87
VBP1-203ENST00000535916 PANK2Q9BZ23 570 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 OSGEPL1Q9H4B0 414 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 TBC1D22BQ9NU19 505 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 BAIAP2L1Q9UHR4 511 aa3.37□□□□□ -1.87
VBP1-203ENST00000535916 TRBV4-1A0A0J9YWV2 114 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 A0A0U1RQG5 324 aaPredicted RBP3.36□□□□□ -1.87
VBP1-203ENST00000535916 VILLO15195 856 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 ADAMDEC1O15204 470 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 FIBPO43427 364 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 IGHV2-70P01814 119 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 ATP1B1P05026 303 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 DANCRP0C864 163 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 ELAVL4P26378 380 aaKnown RBP3.36□□□□□ -1.87
VBP1-203ENST00000535916 PSMB10P40306 273 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 ATP4BP51164 291 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 CDH13P55290 713 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 LYZP61626 148 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 TRIM29Q14134 588 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 FAAH2Q6GMR7 532 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 REG3GQ6UW15 175 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 C3P1Q6ZMU1 363 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 OR10G7Q8NGN6 311 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 SLAMF9Q96A28 289 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 ZIM3Q96PE6 472 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 JPT2Q9H910 190 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 SELENOKQ9Y6D0 94 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 UMODL1Q5DID0 1318 aa3.36□□□□□ -1.87
VBP1-203ENST00000535916 LOC102723996A0A087X1L8 192 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 GPR75-ASB3A0A0A6YYF3 556 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 NEMP2A6NFY4 417 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 TLX2O43763 284 aaPredicted RBP3.35□□□□□ -1.87
VBP1-203ENST00000535916 ERAL1O75616 437 aaKnown RBP3.35□□□□□ -1.87
VBP1-203ENST00000535916 AOC1P19801 751 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 DRD3P35462 400 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 COPB2P35606 906 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 HLCSP50747 726 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 DCAF7P61962 342 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 SGCGQ13326 291 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 TRA2AQ13595 282 aaKnown RBP eCLIP3.35□□□□□ -1.87
VBP1-203ENST00000535916 ZNF146Q15072 292 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 SPATA1Q5VX52 437 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 RNLSQ5VYX0 342 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 DMKNQ6E0U4 476 aaPredicted RBP3.35□□□□□ -1.87
VBP1-203ENST00000535916 FCRLAQ7L513 359 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 KRT77Q7Z794 578 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 RNF130Q86XS8 419 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 PARP8Q8N3A8 854 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 GUF1Q8N442 669 aaKnown RBP3.35□□□□□ -1.87
VBP1-203ENST00000535916 TDRD5Q8NAT2 981 aaKnown RBP3.35□□□□□ -1.87
VBP1-203ENST00000535916 LPGAT1Q92604 370 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 ABT1Q9ULW3 272 aaKnown RBP3.35□□□□□ -1.87
VBP1-203ENST00000535916 CHKBQ9Y259 395 aa3.35□□□□□ -1.87
VBP1-203ENST00000535916 PTRH2Q9Y3E5 179 aaKnown RBP3.35□□□□□ -1.87
VBP1-203ENST00000535916 MYH14Q7Z406 1995 aaKnown RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 IGHV3-38A0A0C4DH36 116 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 F5H0A9 414 aaPredicted RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 AP3D1O14617 1153 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 SURF4O15260 269 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 PRB2P02812 416 aaPredicted RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 PCP11498 1178 aaKnown RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 CD27P26842 260 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 MAPK12P53778 367 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 ARF3P61204 181 aaPredicted RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 HNRNPKP61978 463 aaKnown RBP eCLIP3.34□□□□□ -1.87
VBP1-203ENST00000535916 ARF1P84077 181 aaKnown RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 FKBP3Q00688 224 aaKnown RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 PRKG2Q13237 762 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 MCMDC2Q4G0Z9 681 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 C4orf50Q6ZRC1 276 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 FAM89BQ8N5H3 189 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 C11orf42Q8N5U0 333 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 OR4K1Q8NGD4 311 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 OR52B6Q8NGF0 335 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 NSMAFQ92636 917 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 RSRC1Q96IZ7 334 aaKnown RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 UBAC1Q9BSL1 405 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 MAK16Q9BXY0 300 aaKnown RBP3.34□□□□□ -1.87
VBP1-203ENST00000535916 ZMYND12Q9H0C1 365 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 WDR83OSQ9Y284 106 aa3.34□□□□□ -1.87
VBP1-203ENST00000535916 TRIM49BA6NDI0 452 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 OGTO15294 1046 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 GFPT2O94808 682 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 SELEP16581 610 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 VAMP7P51809 220 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 NUCB1Q02818 461 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 RFTN1Q14699 578 aaPredicted RBP3.33□□□□□ -1.88
VBP1-203ENST00000535916 ANKRD23Q86SG2 305 aa3.33□□□□□ -1.88
VBP1-203ENST00000535916 OR8H2Q8N162 312 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms