RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 SETDB1Q15047 1291 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 ZC3H12BQ5HYM0 836 aaKnown RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 CATSPEREQ5SY80 951 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 CEP85LQ5SZL2 805 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 FRMPD2BQ6IN97 320 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 CYB5D1Q6P9G0 228 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 RNF44Q7L0R7 432 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 ADCK2Q7Z695 626 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 ZFAND4Q86XD8 727 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 PLD3Q8IV08 490 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 SRRM1Q8IYB3 904 aaKnown RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 PTGR2Q8N8N7 351 aaPredicted RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 ABHD11Q8NFV4 315 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 OR4K1Q8NGD4 311 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 SLC5A11Q8WWX8 675 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 N4BP2L2Q92802 583 aaPredicted RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 SPRY4Q9C004 299 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 SPRTNQ9H040 489 aaPredicted RBP11.56□□□□□ -0.56
CHD4-203ENST00000535717 SYNPO2LQ9H987 977 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 DNAJC11Q9NVH1 559 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 SERTAD3Q9UJW9 196 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 ACSL6Q9UKU0 697 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 EMCNQ9ULC0 261 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 TMCO1Q9UM00 188 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 DYRK1BQ9Y463 629 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 KCNE2Q9Y6J6 123 aa11.56□□□□□ -0.56
CHD4-203ENST00000535717 ACACAQ13085 2346 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 LOC105369274A0A096LPK9 316 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 LOC102723532A0A0G2JNH3 316 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 A0A0J9YVX5 310 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 COPEO14579 308 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 RGS16O15492 202 aaPredicted RBP11.55□□□□□ -0.56
CHD4-203ENST00000535717 TLX3O43711 291 aaPredicted RBP11.55□□□□□ -0.56
CHD4-203ENST00000535717 SMIM24O75264 130 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 GLRA3O75311 464 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 OR2B3O76000 313 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 SIX3O95343 332 aaPredicted RBP11.55□□□□□ -0.56
CHD4-203ENST00000535717 EZRP15311 586 aaKnown RBP11.55□□□□□ -0.56
CHD4-203ENST00000535717 EPORP19235 508 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 CCT5P48643 541 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 CCR8P51685 355 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 ITGA1P56199 1179 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 MEF2AQ02078 507 aaPredicted RBP11.55□□□□□ -0.56
CHD4-203ENST00000535717 RELAQ04206 551 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 CDC16Q13042 620 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 CASP8Q14790 479 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 PCBP2Q15366 365 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHD4-203ENST00000535717 PDK4Q16654 411 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 PRAMEF17Q5VTA0 474 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 NXPE4Q6UWF7 544 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 SLCO4C1Q6ZQN7 724 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 LRRC70Q7Z2Q7 622 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 OR4N4Q8N0Y3 316 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 BANPQ8N9N5 519 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 SNX31Q8N9S9 440 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 FGF11Q92914 225 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 PHF21BQ96EK2 531 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 ZNF285Q96NJ3 590 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 OR2A5Q96R48 311 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 ZFYVE21Q9BQ24 234 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 SELENOSQ9BQE4 189 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 ULBP3Q9BZM4 244 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 C12orf65Q9H3J6 166 aaKnown RBP11.55□□□□□ -0.56
CHD4-203ENST00000535717 OPTCQ9UBM4 332 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 GRID1Q9ULK0 1009 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 CELSR3Q9NYQ7 3312 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 SDK2Q58EX2 2172 aa11.55□□□□□ -0.56
CHD4-203ENST00000535717 TEX51A0A1B0GUA7 166 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 FEZF1A0PJY2 475 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 A8MT66 165 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 E7EQ34 232 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 H0YGG7 62 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 STX16-NPEPL1H3BU86 382 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 K7EPI3 171 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 STX16O14662 325 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 LCMT2O60294 686 aaKnown RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 DLX3O60479 287 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 PLIN3O60664 434 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 SRPX2O60687 465 aaPredicted RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 PRAMEF4O60810 478 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 SCRG1O75711 98 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 STK17BO94768 372 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 KIAA0754O94854 1291 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 PROCP04070 461 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 NTRK1P04629 796 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 CREB1P16220 341 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 GNAZP19086 355 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 VARSP26640 1264 aaKnown RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 CD82P27701 267 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 EEF1DP29692 281 aaKnown RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 VSX2P58304 361 aaPredicted RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 ARF3P61204 181 aaPredicted RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 COL9A2Q14055 689 aaPredicted RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 PRAMEF9Q5VWM5 478 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 TIPARPQ7Z3E1 657 aaKnown RBP11.54□□□□□ -0.56
CHD4-203ENST00000535717 CROCCP2Q86T23 111 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 TMPRSS11BQ86T26 416 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 TMEM126BQ8IUX1 230 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 GPR135Q8IZ08 494 aa11.54□□□□□ -0.56
CHD4-203ENST00000535717 TEX9Q8N6V9 391 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms