RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 MYL6BP14649 208 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 EPCAMP16422 314 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 ELAVL4P26378 380 aaKnown RBP4.26□□□□□ -1.73
PRKDC-205ENST00000535375 RBMS1P29558 406 aaKnown RBP4.26□□□□□ -1.73
PRKDC-205ENST00000535375 MC5RP33032 325 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 CETN2P41208 172 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 RAB28P51157 221 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 RBPJQ06330 500 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 OPCMLQ14982 345 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 TMEM132DQ14C87 1099 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 CRY2Q49AN0 593 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 CTR9Q6PD62 1173 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 FRRS1Q6ZNA5 592 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 FCRLAQ7L513 359 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 ZER1Q7Z7L7 766 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 MFN1Q8IWA4 741 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 MAML2Q8IZL2 1156 aaPredicted RBP4.26□□□□□ -1.73
PRKDC-205ENST00000535375 METTL4Q8N3J2 472 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 FAM89BQ8N5H3 189 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 RASGEF1AQ8N9B8 481 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 Q8NBF4 154 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 PRSS33Q8NF86 280 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 ATP8B4Q8TF62 1192 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 HDAC11Q96DB2 347 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 MAP3K3Q99759 626 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 SLC2A11Q9BYW1 496 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 HOXD1Q9GZZ0 328 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 BCCIPQ9P287 314 aaKnown RBP eCLIP4.26□□□□□ -1.73
PRKDC-205ENST00000535375 TTLL3Q9Y4R7 772 aa4.26□□□□□ -1.73
PRKDC-205ENST00000535375 TRBV5-5A0A0J9YX44 114 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 PI15O43692 258 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 ATP1B1P05026 303 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 CSN3P07498 182 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 AKR1B1P15121 316 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 AZGP1P25311 298 aaKnown RBP4.25□□□□□ -1.73
PRKDC-205ENST00000535375 TLX1P31314 330 aaPredicted RBP4.25□□□□□ -1.73
PRKDC-205ENST00000535375 LIMK1P53667 647 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 AIMP1Q12904 312 aaKnown RBP4.25□□□□□ -1.73
PRKDC-205ENST00000535375 MTF1Q14872 753 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 NONOQ15233 471 aaKnown RBP eCLIP4.25□□□□□ -1.73
PRKDC-205ENST00000535375 TAB1Q15750 504 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 ZNF239Q16600 458 aaKnown RBP4.25□□□□□ -1.73
PRKDC-205ENST00000535375 GPR33Q49SQ1 333 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 SPINK14Q6IE38 97 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 GPRIN3Q6ZVF9 776 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 ROBO4Q8WZ75 1007 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 RASL10AQ92737 203 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 PRICKLE1Q96MT3 831 aaPredicted RBP4.25□□□□□ -1.73
PRKDC-205ENST00000535375 MUS81Q96NY9 551 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 SLF1Q9BQI6 1058 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 SLC7A10Q9NS82 523 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 ANKEF1Q9NU02 776 aa4.25□□□□□ -1.73
PRKDC-205ENST00000535375 LOC105371242A0A075B767 164 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 TRAV24A0A0B4J272 114 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 AP5Z1O43299 807 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 SPRY1O43609 319 aaPredicted RBP4.24□□□□□ -1.73
PRKDC-205ENST00000535375 CELF2O95319 508 aaKnown RBP4.24□□□□□ -1.73
PRKDC-205ENST00000535375 OR52Z1P0C646 297 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 MYBL1P10243 752 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 CD27P26842 260 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 PDHA2P29803 388 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 SOX3P41225 446 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 ILF2Q12905 390 aaKnown RBP4.24□□□□□ -1.73
PRKDC-205ENST00000535375 ERMARDQ5T6L9 678 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 ZNF343Q6P1L6 599 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 LMNTD2Q8IXW0 634 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 SPAG16Q8N0X2 631 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 OR8H2Q8N162 312 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 LSMEM1Q8N8F7 131 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 C9orf43Q8TAL5 461 aaPredicted RBP4.24□□□□□ -1.73
PRKDC-205ENST00000535375 PIK3R3Q92569 461 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 TSACCQ96A04 125 aaPredicted RBP4.24□□□□□ -1.73
PRKDC-205ENST00000535375 LINC00615Q96LM1 132 aaPredicted RBP4.24□□□□□ -1.73
PRKDC-205ENST00000535375 TDRD1Q9BXT4 1180 aaKnown RBP4.24□□□□□ -1.73
PRKDC-205ENST00000535375 PRDM4Q9UKN5 801 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 CSAG2Q9Y5P2 127 aa4.24□□□□□ -1.73
PRKDC-205ENST00000535375 IGHV3OR16-10A0A075B7F0 116 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 PI4K2BG5E9Z4 385 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 TFECO14948 347 aaPredicted RBP4.23□□□□□ -1.73
PRKDC-205ENST00000535375 GSRP00390 522 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 THEGLP0DJG4 465 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 CYP11B2P19099 503 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 GATA2P23769 480 aaPredicted RBP4.23□□□□□ -1.73
PRKDC-205ENST00000535375 HSD17B3P37058 310 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 NUCB1Q02818 461 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 ACSM1Q08AH1 577 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 RASGEF1BQ0VAM2 473 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 FGD3Q5JSP0 725 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 KRT80Q6KB66 452 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 SLC24A5Q71RS6 500 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 PLPPR4Q7Z2D5 763 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 TLK2Q86UE8 772 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 CATSPERDQ86XM0 798 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 AMER3Q8N944 861 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 AQP11Q8NBQ7 271 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 KCTD6Q8NC69 237 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 MIPOL1Q8TD10 442 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 SLC45A3Q96JT2 553 aa4.23□□□□□ -1.73
PRKDC-205ENST00000535375 GAL3ST4Q96RP7 486 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms