RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ABLIM1O14639 778 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 RCBTB2O95199 551 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 CCNHP51946 323 aaPredicted RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 EEFSECP57772 596 aaKnown RBP17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 DSC3Q14574 896 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 OR4F3Q6IEY1 312 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 ASPNQ9BXN1 380 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 COQ10BQ9H8M1 238 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 OXSMQ9NWU1 459 aa17.7■□□□□ 0.42
SFSWAP-203ENST00000535236 TLR4O00206 839 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 OR7A10O76100 309 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 PGLSO95336 258 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 JUNP05412 331 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 GXYLT1Q4G148 440 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 LACTB2Q53H82 288 aaPredicted RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC29A3Q9BZD2 475 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 H1F0P07305 194 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 MTHFD1P11586 935 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 FMO3P31513 532 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 TPRG1Q6ZUI0 275 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 NANOGNBQ7Z5D8 188 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 YIPF7Q8N8F6 280 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 BCO2Q9BYV7 579 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 DENND2DQ9H6A0 471 aaPredicted RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 ADH1BP00325 375 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 OAS1P00973 400 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 CYP11A1P05108 521 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 ADGRE1Q14246 886 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 LRRC66Q68CR7 880 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 FRMD7Q6ZUT3 714 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF554Q86TJ5 538 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF101Q8IZC7 436 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 KIAA1143Q96AT1 154 aaPredicted RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 GORASP1Q9BQQ3 440 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 TMEM98Q9Y2Y6 226 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 TTC34A8MYJ7 566 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF878C9JN71 531 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 TNFRSF10BO14763 440 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 TMEM63AO94886 807 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 SIX3O95343 332 aaPredicted RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 C22orf39Q6P5X5 142 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 SMOC2Q9H3U7 446 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 SALL4Q9UJQ4 1053 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 INSL5Q9Y5Q6 135 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 MTTPP55157 894 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 CSTF1Q05048 431 aaKnown RBP17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 GRM2Q14416 872 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 OGFOD2Q6N063 350 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 PLCZ1Q86YW0 608 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 TMEM126BQ8IUX1 230 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 OR8H1Q8NGG4 311 aa17.69■□□□□ 0.42
SFSWAP-203ENST00000535236 MROH2AA6NES4 1674 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 FGF18O76093 207 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 PIGRP01833 764 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 GP1BBP13224 206 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 DNAJA1P31689 397 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 ACSL1P33121 698 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC11A1P49279 550 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF41P51814 821 aaPredicted RBP17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 PER3P56645 1201 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 DUOXA1Q1HG43 343 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 OR6N1Q8NGY5 312 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 TRNAU1APQ9NX07 287 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 TRBC2A0A5B9 178 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 KDELR3O43731 214 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 RPP14O95059 124 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 PFKMP08237 780 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 APLP1P51693 650 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 CARTPTQ16568 116 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 PHOSPHO1Q8TCT1 267 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 PCDHB3Q9Y5E6 796 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF670-ZNF695F2Z2N8 137 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 CSN2P05814 226 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 JMJD7P0C870 316 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 ANO7Q6IWH7 933 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 CMTR2Q8IYT2 770 aaKnown RBP17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 OR56A1Q8NGH5 318 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 KCNC2Q96PR1 638 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 C12orf4Q9NQ89 552 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC17A6Q9P2U8 582 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 TNFRSF10DQ9UBN6 386 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 POMPQ9Y244 141 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 A8MT66 165 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 ANKRD66B4E2M5 251 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 PPEF2O14830 753 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 OPN1SWP03999 348 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC6A4P31645 630 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 TMEM110Q86TL2 294 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 SPERTQ8NA61 448 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF516Q92618 1163 aa17.68■□□□□ 0.42
SFSWAP-203ENST00000535236 E7EQ34 232 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 RAB8AP61006 207 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 PRAMEF17Q5VTA0 474 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 KLHDC7BQ96G42 594 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 CITED4Q96RK1 184 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 CHIAQ9BZP6 476 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 AKTIPQ9H8T0 292 aa17.67■□□□□ 0.42
SFSWAP-203ENST00000535236 SIX2Q9NPC8 291 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms