RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CCDC54	Q8NEL0	328 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TPSD1	Q9BZJ3	242 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	NKIRAS2	Q9NYR9	191 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GALP	Q9UBC7	116 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MAN2B2	Q9Y2E5	1009 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	LOC730098	B7Z3J9	87 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TCEA3	O75764	348 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	HMGN1	P05114	100 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	JUN	P05412	331 aa	Known RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	DNAJB1	P25685	340 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SHPRH	Q149N8	1683 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PJA1	Q8NG27	643 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SCAMP4	Q969E2	229 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RC3H2	Q9HBD1	1191 aa	Known RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GRHL1	Q9NZI5	618 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FTSJ1	Q9UET6	329 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PRODH2	Q9UF12	536 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	IGKV6-21	A0A0C4DH24	114 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SLC30A4	O14863	429 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GSC2	O15499	205 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	AHSG	P02765	367 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OGDH	Q02218	1023 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR6K6	Q8NGW6	343 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PLEKHO2	Q8TD55	490 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TOX2	Q96NM4	488 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	LMAN1L	Q9HAT1	526 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PRTFDC1	Q9NRG1	225 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	NALCN	Q8IZF0	1738 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TTC34	A8MYJ7	566 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MANBA	O00462	879 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CDH1	P12830	882 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	VSX2	P58304	361 aa	Predicted RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KCNJ11	Q14654	390 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TAS1R3	Q7RTX0	852 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CILP2	Q8IUL8	1156 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR5M3	Q8NGP4	307 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PHOSPHO1	Q8TCT1	267 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GRHL3	Q8TE85	626 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CENPN	Q96H22	339 aa	Predicted RBP	15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	C17orf62	Q9BQA9	187 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	DEFB126	Q9BYW3	111 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	XYLT2	Q9H1B5	865 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CTPS2	Q9NRF8	586 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RHBDL2	Q9NX52	303 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MARK1	Q9P0L2	795 aa		15.3	■□□□□ 0.04
NCAPD3-213	ENST00000534532	AHSA1	O95433	338 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	WDR5	P61964	334 aa	Known RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	VLDLR	P98155	873 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PDCD4	Q53EL6	469 aa	Known RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FAM47B	Q8NA70	645 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZSWIM3	Q96MP5	696 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	POLR2J3	Q9H1A7	115 aa	Known RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	NPIPA5	E9PKD4	350 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZDHHC14	Q8IZN3	488 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR10H4	Q8NGA5	316 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	AGAP11	Q8TF27	550 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TGM7	Q96PF1	710 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ASPN	Q9BXN1	380 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	HHATL	Q9HCP6	504 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RARRES3	Q9UL19	164 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FZD4	Q9ULV1	537 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	NPIPA1	Q9UND3	350 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CLIC1	O00299	241 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KHNYN	O15037	678 aa	Known RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	POU2F1	P14859	743 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	JUP	P14923	745 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	RPL5	P46777	297 aa	Known RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MTPN	P58546	118 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SELENOV	P59797	346 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SUSD1	Q6UWL2	747 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	GOLGA7	Q7Z5G4	137 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PLXDC1	Q8IUK5	500 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SLCO2A1	Q92959	643 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CIB1	Q99828	191 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SMPD3	Q9NY59	655 aa	Predicted RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	B4GALT7	Q9UBV7	327 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PEAK1	Q9H792	1746 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	IGLON5	A6NGN9	336 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ARHGEF33	A8MVX0	844 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ABAT	P80404	500 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	ZNF267	Q14586	743 aa	Predicted RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	QPRT	Q15274	297 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TMCO2	Q7Z6W1	182 aa	Predicted RBP	15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CPNE8	Q86YQ8	564 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR6N1	Q8NGY5	312 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TP53INP1	Q96A56	240 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	KIAA1191	Q96A73	305 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	COQ8B	Q96D53	544 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR51B5	Q9H339	312 aa		15.29	■□□□□ 0.04
NCAPD3-213	ENST00000534532	OR6C74	A6NCV1	312 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	FAM159B	A6NKW6	160 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	BTN3A3	O00478	584 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	TNFRSF10B	O14763	440 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MUSK	O15146	869 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	CPNE3	O75131	537 aa	Known RBP	15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	SYNGR4	O95473	234 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	LINGO3	P0C6S8	592 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PRKAR1A	P10644	381 aa		15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	MYCLP1	P12525	358 aa	Predicted RBP	15.28	■□□□□ 0.04
NCAPD3-213	ENST00000534532	PTCHD1	Q96NR3	888 aa		15.28	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms