RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ABHD11Q8NFV4 315 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 NLGN4YQ8NFZ3 816 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-214ENST00000533209 NEIL2Q969S2 332 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 ESAMQ96AP7 390 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 CABS1Q96KC9 395 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 OR2A5Q96R48 311 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 SELENOSQ9BQE4 189 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 PCMTD2Q9NV79 361 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 WWOXQ9NZC7 414 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 SLC22A14Q9Y267 594 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 CFAP47Q6ZTR5 3102 aa11.48□□□□□ -0.57
SSBP3-214ENST00000533209 A0A1W2PPM1 405 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 SYCE1LA8MT33 242 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 FOXO6A8MYZ6 492 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 MAP2K7O14733 419 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ZSCAN9O15535 394 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 KLK8O60259 260 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 SRPX2O60687 465 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 IPO13O94829 963 aaKnown RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 WDR47O94967 919 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 MT-ND3P03897 115 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 S100BP04271 92 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 HSPA7P48741 367 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 AGTR2P50052 363 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ATP1A2P50993 1020 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ABHD18Q0P651 414 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 GPS2Q13227 327 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 SRSF6Q13247 344 aaKnown RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 TSNAXIP1Q2TAA8 658 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 TCTE1Q5JU00 501 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 WASHC2DQ5SRD0 308 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 CATSPEREQ5SY80 951 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 TLDC1Q6P9B6 456 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 LRRC69Q6ZNQ3 347 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 VASH2Q86V25 355 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 CNPY4Q8N129 248 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ESX1Q8N693 406 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF655Q8N720 491 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 OR4K1Q8NGD4 311 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ACMSDQ8TDX5 336 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 UBTD2Q8WUN7 234 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 SLC5A11Q8WWX8 675 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 TSNARE1Q96NA8 513 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 CNOT10Q9H9A5 744 aaKnown RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ACTR5Q9H9F9 607 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 AKIRIN1Q9H9L7 192 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-214ENST00000533209 STARD5Q9NSY2 213 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 DYRK1BQ9Y463 629 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ASB1Q9Y576 335 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 AP1M2Q9Y6Q5 423 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 SPTBP11277 2137 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 ANKRD12Q6UB98 2062 aa11.47□□□□□ -0.57
SSBP3-214ENST00000533209 LOC101059948A0A1B0GTJ6 334 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 FITM1A5D6W6 292 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 H0YGG7 62 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 GOLGA8RI6L899 631 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 EFSO43281 561 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 LCMT2O60294 686 aaKnown RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 CDH16O75309 829 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 STK16O75716 305 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 HBQ1P09105 142 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 RBP1P09455 135 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 SBK3P0C264 359 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 PYGBP11216 843 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 RORAP35398 523 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 BCL6P41182 706 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 STAT5AP42229 794 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 CCR8P51685 355 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 ARF3P61204 181 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 RPS15AP62244 130 aaKnown RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 COL9A2Q14055 689 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 PRTGQ2VWP7 1150 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF385CQ66K41 422 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 RHBDD2Q6NTF9 364 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 NXPE4Q6UWF7 544 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 ZNF517Q6ZMY9 492 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 SH2D5Q6ZV89 423 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 DSELQ8IZU8 1212 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 TMEM151AQ8N4L1 468 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 IL22RA1Q8N6P7 574 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 SCYL1Q96KG9 808 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 LRFN5Q96NI6 719 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 CCNL2Q96S94 520 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 CD244Q9BZW8 370 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 SPNS1Q9H2V7 528 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 PELI2Q9HAT8 420 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 LHX9Q9NQ69 397 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 DNAJC11Q9NVH1 559 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 IRAK4Q9NWZ3 460 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 XPR1Q9UBH6 696 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 DHCR7Q9UBM7 475 aaKnown RBP11.46□□□□□ -0.57
SSBP3-214ENST00000533209 PADI1Q9ULC6 663 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 SRPK3Q9UPE1 567 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 PLAAQ9Y263 795 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 KCNE2Q9Y6J6 123 aa11.46□□□□□ -0.57
SSBP3-214ENST00000533209 KCNE1BA0A087WTH5 132 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 TLDC2A0PJX2 215 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 FEZF1A0PJY2 475 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 TK2O00142 265 aa11.45□□□□□ -0.58
SSBP3-214ENST00000533209 MEN1O00255 615 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms