RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SGO1Q5FBB7 561 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 TCEAL6Q6IPX3 200 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 OGFOD2Q6N063 350 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 GATAD2AQ86YP4 633 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 DSELQ8IZU8 1212 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 SDR16C5Q8N3Y7 309 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 KYQ8NBH2 561 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 TCEAL3Q969E4 200 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 ZNF570Q96NI8 536 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 KIR3DX1Q9H7L2 352 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 TRPS1Q9UHF7 1281 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 GMEB2Q9UKD1 530 aa17.84■□□□□ 0.45
SMPD1-208ENST00000533123 FBP2O00757 339 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 ARHGAP33O14559 1287 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 PRAMEF4O60810 478 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 SLC2A4P14672 509 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 TBPL1P62380 186 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 UBE2IP63279 158 aaKnown RBP17.83■□□□□ 0.45
SMPD1-208ENST00000533123 TBL3Q12788 808 aaKnown RBP17.83■□□□□ 0.45
SMPD1-208ENST00000533123 C6orf136Q5SQH8 315 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 PRAMEF9Q5VWM5 478 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 LRRC56Q8IYG6 542 aaPredicted RBP17.83■□□□□ 0.45
SMPD1-208ENST00000533123 PRSS33Q8NF86 280 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 OR56A3Q8NH54 315 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 BATF3Q9NR55 127 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 RIC8BQ9NVN3 520 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 PACSIN3Q9UKS6 424 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 ICKQ9UPZ9 632 aa17.83■□□□□ 0.45
SMPD1-208ENST00000533123 CLDN9O95484 217 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 EPHA8P29322 1005 aaPredicted RBP17.83■□□□□ 0.44
SMPD1-208ENST00000533123 RAB28P51157 221 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 MAZP56270 477 aaKnown RBP17.83■□□□□ 0.44
SMPD1-208ENST00000533123 GPR18Q14330 331 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 CPSF6Q16630 551 aaKnown RBP eCLIP17.83■□□□□ 0.44
SMPD1-208ENST00000533123 THOC6Q86W42 341 aaKnown RBP17.83■□□□□ 0.44
SMPD1-208ENST00000533123 MIER2Q8N344 545 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 LINC01555Q8NAE3 123 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 FNDC5Q8NAU1 212 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 OR4E2Q8NGC2 313 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 GTPBP2Q9BX10 602 aaKnown RBP17.83■□□□□ 0.44
SMPD1-208ENST00000533123 SDR39U1Q9NRG7 319 aaPredicted RBP17.83■□□□□ 0.44
SMPD1-208ENST00000533123 POT1Q9NUX5 634 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 MRGBPQ9NV56 204 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 DNAJC11Q9NVH1 559 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 PCDHGA5Q9Y5G8 931 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 GPR45Q9Y5Y3 372 aa17.83■□□□□ 0.44
SMPD1-208ENST00000533123 PCM1Q15154 2024 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 LSM1O15116 133 aaKnown RBP17.82■□□□□ 0.44
SMPD1-208ENST00000533123 NOBOXO60393 691 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 SNRPB2P08579 225 aaKnown RBP17.82■□□□□ 0.44
SMPD1-208ENST00000533123 GIMD1P0DJR0 217 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ERGP11308 486 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ERFP50548 548 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 HHEXQ03014 270 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 NR6A1Q15406 480 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ATP6AP1LQ52LC2 224 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 WASHC2DQ5SRD0 308 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 SLC9B2Q86UD5 537 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ZNF761Q86XN6 746 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-208ENST00000533123 LCN9Q8WX39 176 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 MTFMTQ96DP5 389 aaKnown RBP17.82■□□□□ 0.44
SMPD1-208ENST00000533123 OR4K3Q96R72 315 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 CCT7Q99832 543 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 PFDN4Q9NQP4 134 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 AIG1Q9NVV5 245 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 CCL27Q9Y4X3 112 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 CSNK1G3Q9Y6M4 447 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 MANBAO00462 879 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 NR5A2O00482 541 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 WFS1O76024 890 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 IDO1P14902 403 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ACADVLP49748 655 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ERVK-8P63133 956 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ART3Q13508 389 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ARHGAP19Q14CB8 494 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 PLCL1Q15111 1095 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 CYP2A13Q16696 494 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 REP15Q6BDI9 236 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 CAPN13Q6MZZ7 669 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-208ENST00000533123 SPATA19Q7Z5L4 167 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ARL14Q8N4G2 192 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 RAB42Q8N4Z0 105 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 SAP25Q8TEE9 199 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 TEX37Q96LM6 180 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 EFCAB1Q9HAE3 211 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 SPATA7Q9P0W8 599 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 ZNF490Q9ULM2 529 aaPredicted RBP17.82■□□□□ 0.44
SMPD1-208ENST00000533123 MUC6Q6W4X9 2439 aa17.82■□□□□ 0.44
SMPD1-208ENST00000533123 PCDH15Q96QU1 1955 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 SYPP08247 313 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 PKLRP30613 574 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 HSD17B2P37059 387 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 HMGCS1Q01581 520 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 RPS6KA2Q15349 733 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 MAPRE2Q15555 327 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 GSTA3Q16772 222 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 CCDC124Q96CT7 223 aaKnown RBP17.81■□□□□ 0.44
SMPD1-208ENST00000533123 ACAT2Q9BWD1 397 aa17.81■□□□□ 0.44
SMPD1-208ENST00000533123 CCDC177Q9NQR7 707 aaPredicted RBP17.81■□□□□ 0.44
SMPD1-208ENST00000533123 RALGAPA1Q6GYQ0 2036 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms