RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PPP2R2CQ9Y2T4 447 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 DOPEY1Q5JWR5 2465 aa16.96■□□□□ 0.31
PCF11-206ENST00000533018 DIDO1Q9BTC0 2240 aaKnown RBP16.96■□□□□ 0.3
PCF11-206ENST00000533018 CACNA1DQ01668 2161 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 IGKV1-8A0A0C4DH67 115 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 SMAPO00193 183 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 ZBTB14O43829 449 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 HEXBP07686 556 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 TLR1Q15399 786 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 LONRF1Q17RB8 773 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 CCDC137Q6PK04 289 aaKnown RBP16.95■□□□□ 0.3
PCF11-206ENST00000533018 IGFL2Q6UWQ7 119 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 NEK10Q6ZWH5 1172 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 NDUFAF7Q7L592 441 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 MCUQ8NE86 351 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 GIMAP7Q8NHV1 300 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 GRHL3Q8TE85 626 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 ZNF480Q8WV37 535 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 PBKQ96KB5 322 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 PTGFRNQ9P2B2 879 aa16.95■□□□□ 0.3
PCF11-206ENST00000533018 A0A0A6YYC8 382 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 ZCWPW2A0A1B0GU75 182 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 IDSB3KWA1 339 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 E7ENX8 843 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 I3L1I5 382 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 TXNDC9O14530 226 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 HAT1O14929 419 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 KLHL18O94889 574 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 MPC1LP0DKB6 136 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ENO3P13929 434 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 EZRP15311 586 aaKnown RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 COILP38432 576 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 SLC1A2P43004 574 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 TSFMP43897 325 aaKnown RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 EMP3P54852 163 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ARG2P78540 354 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ABATP80404 500 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 CCZ1BP86790 482 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 CCZ1P86791 482 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 TAP2Q03519 686 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 EEF1A2Q05639 463 aaKnown RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 DSG2Q14126 1118 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 GARNL3Q5VVW2 1013 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ATG9BQ674R7 924 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ZNF549Q6P9A3 640 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 UBE2R2Q712K3 238 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 KCNMB4Q86W47 210 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 PLD3Q8IV08 490 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 SPNS2Q8IVW8 549 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ST6GALNAC3Q8NDV1 305 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 CATSPER1Q8NEC5 780 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 CALML6Q8TD86 181 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ASB11Q8WXH4 323 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 KCNJ9Q92806 393 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 MVB12AQ96EY5 273 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 MAGEB10Q96LZ2 347 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 OR2A5Q96R48 311 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 LMF1Q96S06 567 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 NAP1L3Q99457 506 aaPredicted RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 GPR21Q99679 349 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 EBNA1BP2Q99848 306 aaKnown RBP16.94■□□□□ 0.3
PCF11-206ENST00000533018 DRC3Q9H069 523 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 SYNPO2LQ9H987 977 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 C14orf105Q9NVL8 296 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 JRKLQ9Y4A0 524 aa16.94■□□□□ 0.3
PCF11-206ENST00000533018 ITPR2Q14571 2701 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 POLEQ07864 2286 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 SCN3AQ9NY46 2000 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 CELSR2Q9HCU4 2923 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 IGLV3-12A0A075B6K2 115 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 DYTNA2CJ06 578 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 H7BY64 318 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 LDLRP01130 860 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 STATHP02808 62 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 COL8A1P27658 744 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 MFAP5Q13361 173 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 SYT16Q17RD7 645 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 ZNF425Q6IV72 752 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 MAMDC2Q7Z304 686 aaPredicted RBP16.93■□□□□ 0.3
PCF11-206ENST00000533018 CPNE9Q8IYJ1 553 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 FBXO15Q8NCQ5 510 aaPredicted RBP16.93■□□□□ 0.3
PCF11-206ENST00000533018 OR1N1Q8NGS0 311 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 BRIX1Q8TDN6 353 aaKnown RBP16.93■□□□□ 0.3
PCF11-206ENST00000533018 PRAP1Q96NZ9 151 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 BARD1Q99728 777 aaKnown RBP16.93■□□□□ 0.3
PCF11-206ENST00000533018 MKKSQ9NPJ1 570 aaPredicted RBP16.93■□□□□ 0.3
PCF11-206ENST00000533018 IARS2Q9NSE4 1012 aaKnown RBP16.93■□□□□ 0.3
PCF11-206ENST00000533018 KLHL42Q9P2K6 505 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 DHRS7Q9Y394 339 aa16.93■□□□□ 0.3
PCF11-206ENST00000533018 WFS1O76024 890 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 HAUS5O94927 633 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 PRR35P0CG20 571 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 COX6A1P12074 109 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 SLC26A3P40879 764 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 AVPR1BP47901 424 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 MPP1Q00013 466 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 NDUFA9Q16795 377 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 HSP90AA5PQ58FG0 334 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 MFSD4BQ5TF39 518 aa16.92■□□□□ 0.3
PCF11-206ENST00000533018 B3GNTL1Q67FW5 361 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms