RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 H7BY64 318 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 HAT1O14929 419 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 MED26O95402 600 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 ONECUT2O95948 504 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 CD63P08962 238 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 HRH2P25021 359 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 STX2P32856 288 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 PMS2P54278 862 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 SLC12A2P55011 1212 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 PPP1R3AQ16821 1122 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 PRTGQ2VWP7 1150 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 KBTBD12Q3ZCT8 623 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 MRPL14Q6P1L8 145 aaKnown RBP14.68□□□□□ -0.06
CPSF1-210ENST00000532935 FBF1Q8TES7 1133 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 ANKRD49Q8WVL7 239 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 ALKBH8Q96BT7 664 aaKnown RBP14.68□□□□□ -0.06
CPSF1-210ENST00000532935 FBXL8Q96CD0 374 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 TSPAN17Q96FV3 270 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 PRAP1Q96NZ9 151 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 OR2A5Q96R48 311 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 GPR22Q99680 433 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 SLC25A18Q9H1K4 315 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 CAB39LQ9H9S4 337 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 GPAMQ9HCL2 828 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 TMEM184CQ9NVA4 438 aa14.68□□□□□ -0.06
CPSF1-210ENST00000532935 DMGDHQ9UI17 866 aaKnown RBP14.68□□□□□ -0.06
CPSF1-210ENST00000532935 NOVA2Q9UNW9 492 aaKnown RBP14.68□□□□□ -0.06
CPSF1-210ENST00000532935 GCN1Q92616 2671 aaKnown RBP14.68□□□□□ -0.06
CPSF1-210ENST00000532935 SCN3AQ9NY46 2000 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 NPEPPSL1A6NEC2 478 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 CDC7O00311 574 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 CNOT3O75175 753 aaKnown RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 WISP3O95389 354 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 GUCA1CO95843 209 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 PIM1P11309 404 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 NFATC3Q12968 1075 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 USP10Q14694 798 aaKnown RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 ZXDCQ2QGD7 858 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 GLE1Q53GS7 698 aaKnown RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 GRTP1Q5TC63 336 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 CAPN13Q6MZZ7 669 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 LCTLQ6UWM7 567 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 C17orf64Q86WR6 236 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 PLD3Q8IV08 490 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 APLFQ8IW19 511 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 DTWD1Q8N5C7 304 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 METTL27Q8N6F8 245 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 CSNK1A1LQ8N752 337 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 PPM1NQ8N819 430 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 OR56A3Q8NH54 315 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 ATL1Q8WXF7 558 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 RERGQ96A58 199 aaPredicted RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 FKBP10Q96AY3 582 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 PYCR2Q96C36 320 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 C10orf90Q96M02 699 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 FAM129AQ9BZQ8 928 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 MTRF1LQ9UGC7 380 aaKnown RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 SH2B3Q9UQQ2 575 aa14.67□□□□□ -0.06
CPSF1-210ENST00000532935 RUVBL1Q9Y265 456 aaKnown RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 PTRH2Q9Y3E5 179 aaKnown RBP14.67□□□□□ -0.06
CPSF1-210ENST00000532935 RFPL1O75677 317 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 FAM155BO75949 473 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 SLU7O95391 586 aaKnown RBP14.66□□□□□ -0.06
CPSF1-210ENST00000532935 NPPBP16860 134 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 SPRP35270 261 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-210ENST00000532935 FOLR3P41439 243 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 OR1D4P47884 311 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 EMP3P54852 163 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 NAB1Q13506 487 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 SSPNQ14714 243 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 EFTUD2Q15029 972 aaKnown RBP eCLIP14.66□□□□□ -0.067e-13■■■■■ 27
CPSF1-210ENST00000532935 MUM1Q2TAK8 710 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 HKDC1Q2TB90 917 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 CPZQ66K79 652 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 COX15Q7KZN9 410 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 OVCH1Q7RTY7 1134 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 ADAMTSL2Q86TH1 951 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 RAB43Q86YS6 212 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 OR2Y1Q8NGV0 311 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 C9orf43Q8TAL5 461 aaPredicted RBP14.66□□□□□ -0.06
CPSF1-210ENST00000532935 ABHD17AQ96GS6 310 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 CABS1Q96KC9 395 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 HAUS8Q9BT25 410 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 TRIM55Q9BYV6 548 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 DERL2Q9GZP9 239 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 CTNNAL1Q9UBT7 734 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 OARD1Q9Y530 152 aa14.66□□□□□ -0.06
CPSF1-210ENST00000532935 ARGFXA6NJG6 315 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 B8ZZF3 427 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 TXNDC9O14530 226 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 P2RX6O15547 441 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 PHGDHO43175 533 aaKnown RBP14.65□□□□□ -0.06
CPSF1-210ENST00000532935 ALBP02768 609 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 CCDC166P0CW27 439 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 CDH1P12830 882 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 STMN1P16949 149 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 OTX2P32243 289 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 FOXL2P58012 376 aa14.65□□□□□ -0.06
CPSF1-210ENST00000532935 RPS15AP62244 130 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms