RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 PARP16Q8N5Y8 322 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 POC5Q8NA72 575 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 HUS1BQ8NHY5 278 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 ITFG1Q8TB96 612 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 CHURC1Q8WUH1 139 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 TMEM255BQ8WV15 326 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 DNAJB3Q8WWF6 145 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 RSPH1Q8WYR4 309 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 SGCDQ92629 289 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 WBP2Q969T9 261 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 FBXL8Q96CD0 374 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 OR2A14Q96R47 310 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 TEX12Q9BXU0 123 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 MMP28Q9H239 520 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 CYSLTR2Q9NS75 346 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 GDE1Q9NZC3 331 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 ZNF224Q9NZL3 707 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 OGFRQ9NZT2 677 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 MRPL15Q9P015 296 aaKnown RBP3.71□□□□□ -1.82
CD44-235ENST00000532339 NYAP2Q9P242 653 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 SIX4Q9UIU6 781 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 PILRBQ9UKJ0 227 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 NENFQ9UMX5 172 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 VDAC3Q9Y277 283 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 TRPV2Q9Y5S1 764 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 COL6A5A8TX70 2615 aa3.71□□□□□ -1.82
CD44-235ENST00000532339 RP1L1Q8IWN7 2480 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 COL4A2P08572 1712 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ABCA7Q8IZY2 2146 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 A0A1W2PR77 199 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 MYBPHLA2RUH7 354 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 MBLAC1A4D2B0 266 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 OR2A25A4D2G3 310 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 GLOD5A6NK44 160 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 A8MV72 311 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 SPECC1L-ADORA2AF8WAN1 911 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 CTDSP2O14595 271 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ZNF263O14978 683 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 PAPSS1O43252 624 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 SLC25A12O75746 678 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 MTA2O94776 668 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 TPPPO94811 219 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 NDUFB4O95168 129 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ICAM1P05362 532 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 SRPRAP08240 638 aaKnown RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 UQCRFS1P1P0C7P4 283 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 HSPA5P11021 654 aaKnown RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 ZNF182P17025 639 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 PSMC3P17980 439 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 BCKDHBP21953 392 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 FCARP24071 287 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 PTGER3P43115 390 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 CAMPP49913 170 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 GALCP54803 685 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 MFAP4P55083 255 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 RPS6P62753 249 aaKnown RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 NTHL1P78549 312 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 CDC16Q13042 620 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 IKQ13123 557 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 STXBP2Q15833 593 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 NTRK2Q16620 822 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 SOWAHAQ2M3V2 549 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 PCGF3Q3KNV8 242 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 USP41Q3LFD5 358 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 LINC00303Q3SY05 128 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 AMZ1Q400G9 498 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 USH1GQ495M9 461 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ACCSLQ4AC99 568 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 CELF3Q5SZQ8 465 aaKnown RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 FHL5Q5TD97 284 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 GARNL3Q5VVW2 1013 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 LYSMD4Q5XG99 296 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ZNF449Q6P9G9 518 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 FOXL2NBQ6ZUU3 175 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 SFR1Q86XK3 245 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 CCDC13Q8IYE1 715 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 SLC34A3Q8N130 599 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ZBTB2Q8N680 514 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 NKAIN3Q8N8D7 197 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 KCTD6Q8NC69 237 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 SETD7Q8WTS6 366 aaKnown RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 DEPDC1BQ8WUY9 529 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 PRPF31Q8WWY3 499 aaKnown RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 SAT2Q96F10 170 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 DYNLL2Q96FJ2 89 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 CCDC34Q96HJ3 373 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 RADILQ96JH8 1075 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 C3orf30Q96M34 536 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 TMEM68Q96MH6 324 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ABHD1Q96SE0 405 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 BAG1Q99933 345 aaPredicted RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 FAM110AQ9BQ89 295 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 TMEM47Q9BQJ4 181 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 PLK3Q9H4B4 646 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 ZFP14Q9HCL3 533 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 GIMAP4Q9NUV9 329 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 SLC9A2Q9UBY0 812 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 SEC63Q9UGP8 760 aaKnown RBP3.7□□□□□ -1.82
CD44-235ENST00000532339 TUBE1Q9UJT0 475 aa3.7□□□□□ -1.82
CD44-235ENST00000532339 PTRH2Q9Y3E5 179 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms