RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OTOP2Q7RTS6 562 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 R3HCC1LQ7Z5L2 792 aaKnown RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 CHPFQ8IZ52 775 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 HS3ST5Q8IZT8 346 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 CPA6Q8N4T0 437 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 CHDHQ8NE62 594 aaPredicted RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 VPS37AQ8NEZ2 397 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 OR7A2PQ8NGA2 310 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 CYB5D2Q8WUJ1 264 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 EBPLQ9BY08 206 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 TM9SF3Q9HD45 589 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 BTNL2Q9UIR0 455 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 TMEM202A6NGA9 273 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 HIDE1A8MVS5 230 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 PIGAP37287 484 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 SLC14A1Q13336 389 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 LRRC26Q2I0M4 334 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 LRRC23Q53EV4 343 aaPredicted RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 ZNF691Q5VV52 312 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 ZCCHC8Q6NZY4 707 aaKnown RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 LIPIQ6XZB0 460 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 TMEM26Q6ZUK4 368 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 ZNF551Q7Z340 670 aaPredicted RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 TMEM179BQ7Z7N9 219 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 ZZZ3Q8IYH5 903 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 WFIKKN2Q8TEU8 576 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 AP2M1Q96CW1 435 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 REPS1Q96D71 796 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 MTERF1Q99551 399 aaKnown RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 OCEL1Q9H607 264 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 SGK2Q9HBY8 427 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 TMEFF2Q9UIK5 374 aaPredicted RBP16.65■□□□□ 0.26
BRCA2-204ENST00000530893 PCDHB11Q9Y5F2 797 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 KCNE2Q9Y6J6 123 aa16.65■□□□□ 0.26
BRCA2-204ENST00000530893 SCAMP2O15127 329 aaKnown RBP16.64■□□□□ 0.25
BRCA2-204ENST00000530893 RFPL2O75678 378 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 IMPA1P29218 277 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 KDELR2P33947 212 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 CTSCP53634 463 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 ISL1P61371 349 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 SPIDRQ14159 915 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 ANXA8L1Q5VT79 327 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 OR2T5Q6IEZ7 315 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF621Q6ZSS3 439 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 CHST15Q7LFX5 561 aaPredicted RBP16.64■□□□□ 0.25
BRCA2-204ENST00000530893 NLRP8Q86W28 1048 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 SETD9Q8NE22 299 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 OR2T29Q8NH02 315 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF566Q969W8 418 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 CXorf40BQ96DE9 158 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 MED8Q96G25 268 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 IL23AQ9NPF7 189 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 HSPE1-MOB4S4R3N1 261 aa16.64■□□□□ 0.25
BRCA2-204ENST00000530893 KRT87PA6NCN2 255 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 DPM1O60762 260 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 XYLBO75191 536 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 UGT2B11O75310 529 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ATE1O95260 518 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF682O95780 498 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 SLC16A8O95907 504 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 B3GALT4O96024 378 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 SEMG1P04279 462 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 HNRNPA1P09651 372 aaKnown RBP eCLIP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 CCDC159P0C7I6 412 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 POLR2IP36954 125 aaKnown RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 XAF1Q6GPH4 301 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 CBLL1Q75N03 491 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 EIF3MQ7L2H7 374 aaKnown RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 KIAA1958Q8N8K9 716 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 NAT16Q8N8M0 369 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 PIK3C3Q8NEB9 887 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 RAB2BQ8WUD1 216 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 FBLIM1Q8WUP2 373 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 SORCS1Q8WY21 1168 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 OR4K3Q96R72 315 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 DUSP26Q9BV47 211 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ASPSCR1Q9BZE9 553 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ZCCHC2Q9C0B9 1178 aaKnown RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 FANCEQ9HB96 536 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 BAG5Q9UL15 447 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 WNT6Q9Y6F9 365 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 NPC1O15118 1278 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 B4GAT1O43505 415 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 FABP3P05413 133 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ABCB1P08183 1280 aaPredicted RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 IGFBP5P24593 272 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 DNAJA1P31689 397 aaKnown RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 HPCAL1P37235 193 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 EMP3P54852 163 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 CD47Q08722 323 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ACOX1Q15067 660 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 BCL7AQ4VC05 210 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 PRSS36Q5K4E3 855 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 ZNF648Q5T619 568 aaPredicted RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 CPTPQ5TA50 214 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 PLPP4Q5VZY2 271 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 GALNT18Q6P9A2 607 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 TMEM220Q6QAJ8 160 aa16.63■□□□□ 0.25
BRCA2-204ENST00000530893 PIWIL3Q7Z3Z3 882 aaKnown RBP16.63■□□□□ 0.25
BRCA2-204ENST00000530893 SPARTQ8N0X7 666 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms