RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 RRN3P2A6NIE6 340 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 E9PAM4 449 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 AIPO00170 330 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 NFKBIEO00221 500 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PHYHO14832 338 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 SELENOFO60613 162 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 TRIM13O60858 407 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PMPCBO75439 489 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 STX11O75558 287 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CDC123O75794 336 aaPredicted RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 PIAS1O75925 651 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 WDR47O94967 919 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PRSS23O95084 383 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 OAZ2O95190 189 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 SGPL1O95470 568 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 ANGPTL1O95841 491 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PLATP00750 562 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 TGFB1P01137 390 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 POMCP01189 267 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 HRGP04196 525 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 FGF2P09038 288 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 OR56A5P0C7T3 313 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 RNF224P0DH78 156 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CSH1P0DML2 217 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CSH2P0DML3 217 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 GJA1P17302 382 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 HOXB6P17509 224 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 CD58P19256 250 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 TFE3P19532 575 aaPredicted RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 OGNP20774 298 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 CAPN3P20807 821 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 ACO1P21399 889 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 ATP5F1P24539 256 aaPredicted RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 ITGB8P26012 769 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CA5AP35218 305 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 GPX4P36969 197 aaPredicted RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 RFC3P40938 356 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PPP3CCP48454 512 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 GLUD2P49448 558 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CASP4P49662 377 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 ARL4DP49703 201 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 EPHA5P54756 1037 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CLDN20P56880 219 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 YWHAZP63104 245 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 RPA4Q13156 261 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 FASTKQ14296 549 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 GRM4Q14833 912 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 MEP1AQ16819 746 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 TATDN3Q17R31 274 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CTU2Q2VPK5 515 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 HFEQ30201 348 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 ZIK1Q3SY52 487 aaPredicted RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 TIMM50Q3ZCQ8 353 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 AARDQ4LEZ3 155 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CCDC157Q569K6 752 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 BICRALQ6AI39 1079 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 TCEAL6Q6IPX3 200 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PLBD1Q6P4A8 553 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 POMZP3Q6PJE2 187 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 GK5Q6ZS86 529 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 FAM92BQ6ZTR7 304 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 USP53Q70EK8 1073 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 SSX9Q7RTT3 188 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PIGZQ86VD9 579 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PROSER1Q86XN7 944 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 RNF130Q86XS8 419 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 HIPK1Q86Z02 1210 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 SPPL2CQ8IUH8 684 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 SLC22A9Q8IVM8 553 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 IGDCC3Q8IVU1 814 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 DNAJC10Q8IXB1 793 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 MCOLN2Q8IZK6 566 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CRYBG2Q8N1P7 616 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PELI3Q8N2H9 469 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 C12orf45Q8N5I9 185 aaPredicted RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 MINDY1Q8N5J2 469 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 LRRC17Q8N6Y2 441 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 WDSUB1Q8N9V3 476 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 MARCH10Q8NA82 808 aaPredicted RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 DMBX1Q8NFW5 382 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 OR52K1Q8NGK4 314 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 CLHC1Q8NHS4 586 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 WDR36Q8NI36 951 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 LMO3Q8TAP4 145 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 ITFG1Q8TB96 612 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 BPIFB1Q8TDL5 484 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 EXOSC8Q96B26 276 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 WBP1Q96G27 269 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 PDLIM5Q96HC4 596 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 ZC3H10Q96K80 434 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 LURAP1Q96LR2 239 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 HHIPQ96QV1 700 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 ZBTB18Q99592 522 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 SSX3Q99909 188 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 RBM4BQ9BQ04 359 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 HTATIP2Q9BUP3 242 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 TRIM62Q9BVG3 475 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 RBM4Q9BWF3 364 aaKnown RBP5.65□□□□□ -1.5
CD44-225ENST00000527326 GPR61Q9BZJ8 451 aa5.65□□□□□ -1.5
CD44-225ENST00000527326 SRRQ9GZT4 340 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms