RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CCDC138Q96M89 665 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC42Q96M95 316 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PRICKLE1Q96MT3 831 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PRMT1Q99873 361 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HERPUD2Q9BSE4 406 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PHF7Q9BWX1 381 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 DNAI2Q9GZS0 605 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SYNCQ9H7C4 482 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TRPV4Q9HBA0 871 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HPS4Q9NQG7 708 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM248Q9NWD8 314 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 GPATCH2LQ9NWQ4 482 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 COX16Q9P0S2 106 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 EPS15L1Q9UBC2 864 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 UXTQ9UBK9 157 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ERRFI1Q9UJM3 462 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ANAPC7Q9UJX3 599 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 AGO1Q9UL18 857 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CDH7Q9ULB5 785 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ARHGAP26Q9UNA1 814 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PACSIN2Q9UNF0 486 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MFHAS1Q9Y4C4 1052 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PCDHGB2Q9Y5G2 931 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 BZW2Q9Y6E2 419 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 RALGAPA1Q6GYQ0 2036 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM131Q92545 1883 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF106Q9H2Y7 1883 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZFC3H1O60293 1989 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 THADAQ6YHU6 1953 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ABCA7Q8IZY2 2146 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 IGLV3-10A0A075B6K4 115 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TRAV19A0A0A6YYK7 116 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MACROD2A1Z1Q3 448 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FAM90A18PA6NE21 464 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FAM90A16PA6NEW6 464 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FAM90A9PA6NNJ1 464 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM110-MUSTN1A8MSY1 372 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 BTNL10A8MVZ5 291 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FAM90A5PA8MXJ8 464 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF197O14709 1029 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 CAPN9O14815 690 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ACSL4O60488 711 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TSPAN3O60637 253 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 KCNJ13O60928 360 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ECI2O75521 394 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FGF19O95750 216 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MOCS2O96007 188 aaPredicted RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TPM1P09493 284 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 H2AFZP0C0S5 128 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FAM90A15PP0C7V4 464 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FAM90A14PP0C7W9 464 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MYBL1P10243 752 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 RALAP11233 206 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 PRPH2P23942 346 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 IL4RP24394 825 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 PSMA2P25787 234 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MIPP30301 263 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 CORO1AP31146 461 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 GDI1P31150 447 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 OPRD1P41143 372 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MAGEA1P43355 309 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ARSEP51690 589 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 HADHBP55084 474 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 DLX5P56178 289 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TBX4P57082 545 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TMPRSS3P57727 454 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TUBA1BP68363 451 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 NME3Q13232 169 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MESDQ14696 234 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 KCTD19Q17RG1 926 aaPredicted RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 KIF19Q2TAC6 998 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 BTBD16Q32M84 506 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 SLC25A52Q3SY17 297 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ALFQ53S48 1182 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MS4A13Q5J8X5 152 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 KCNT1Q5JUK3 1230 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM215Q68D42 235 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 RFWD3Q6PCD5 774 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 DCUN1D2Q6PH85 259 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 RHBDF2Q6PJF5 856 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 RINLQ6ZS11 566 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 H2AFVQ71UI9 128 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 STRADAQ7RTN6 431 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 SLFN11Q7Z7L1 901 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TMPRSS12Q86WS5 348 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM25Q86YD3 366 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ARHGAP18Q8N392 663 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 NIPA2Q8N8Q9 360 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 TDRD5Q8NAT2 981 aaKnown RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 FAM71BQ8TC56 605 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 CTNNBL1Q8WYA6 563 aaPredicted RBP2.95□□□□□ -1.94
CSDE1-208ENST00000524652 RFFLQ8WZ73 363 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 KRT35Q92764 455 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 MUL1Q969V5 352 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 ELSPBP1Q96BH3 223 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 NECTIN4Q96NY8 510 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 SERPINB11Q96P15 392 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 GCNAQ96QF7 691 aa2.95□□□□□ -1.94
CSDE1-208ENST00000524652 SNRNP25Q9BV90 132 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms