RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 STATHP02808 62 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 MYBL2P10244 700 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 FMO4P31512 558 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 STIP1P31948 543 aaKnown RBP24.59■■□□□ 1.53
PVT1-219ENST00000523427 SNX1Q13596 522 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 C3AR1Q16581 482 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 MFSD4BQ5TF39 518 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 PLCD4Q9BRC7 762 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 TINAGQ9UJW2 476 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 ADGRG4Q8IZF6 3080 aa24.59■■□□□ 1.53
PVT1-219ENST00000523427 BTNL10A8MVZ5 291 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 SLC19A2O60779 497 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 SEC24DO94855 1032 aaPredicted RBP24.58■■□□□ 1.53
PVT1-219ENST00000523427 SLC26A3P40879 764 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 RAD9BQ6WBX8 426 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 ADCK2Q7Z695 626 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 ZC3H7AQ8IWR0 971 aaKnown RBP24.58■■□□□ 1.53
PVT1-219ENST00000523427 OR9A1PQ8NGU1 263 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 RERGQ96A58 199 aaPredicted RBP24.58■■□□□ 1.53
PVT1-219ENST00000523427 MVB12AQ96EY5 273 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 TSPAN10Q9H1Z9 355 aaPredicted RBP24.58■■□□□ 1.53
PVT1-219ENST00000523427 TAC3Q9UHF0 121 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 CSMD2Q7Z408 3487 aa24.58■■□□□ 1.53
PVT1-219ENST00000523427 MIF4GDA9UHW6 222 aaKnown RBP24.57■■□□□ 1.52
PVT1-219ENST00000523427 FOXS1O43638 330 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 NIPSNAP2O75323 286 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 C8orf89P0DMQ9 161 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 ICAM2P13598 275 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 NMBRP28336 390 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 EFNA3P52797 238 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 ADORA2A-AS1P86434 159 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 NAA25Q14CX7 972 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 LONRF1Q17RB8 773 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.57■■□□□ 1.521e-5■□□□□ 9.3
PVT1-219ENST00000523427 ZNF766Q5HY98 468 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.57■■□□□ 1.52
PVT1-219ENST00000523427 PCID2Q5JVF3 399 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 CTSL3PQ5NE16 218 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 PAQR7Q86WK9 346 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 PLD3Q8IV08 490 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 C1orf54Q8WWF1 131 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 METTL21AQ8WXB1 218 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 SMPDL3AQ92484 453 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 DRC3Q9H069 523 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 RNF32Q9H0A6 362 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 KLHL1Q9NR64 748 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 PCYOX1Q9UHG3 505 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 TEKT2Q9UIF3 430 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 TACC2O95359 2948 aa24.57■■□□□ 1.52
PVT1-219ENST00000523427 LOC102723996A0A087X1L8 192 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 IGKV1-8A0A0C4DH67 115 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 A0A1W2PQ72 361 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 ARHGEF33A8MVX0 844 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 GOLGA8KD6RF30 607 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 GOLGA8TH3BQL2 631 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 LIASO43766 372 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 ZSCAN5DPP0CG00 497 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 EMP3P54852 163 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 ANKRD20A4Q4UJ75 823 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 XKRXQ6PP77 449 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 CES3Q6UWW8 571 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 LRRC6Q86X45 466 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 SYCE1Q8N0S2 351 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 PPFIBP2Q8ND30 876 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 PEX13Q92968 403 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 IMMP1LQ96LU5 166 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 TUBB6Q9BUF5 446 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 TRIM8Q9BZR9 551 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 ANKRD10Q9NXR5 420 aa24.56■■□□□ 1.52
PVT1-219ENST00000523427 C19orf84I3L1E1 186 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 P2RX6O15547 441 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 CHRM3P20309 590 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 RPS3P23396 243 aaKnown RBP eCLIP24.55■■□□□ 1.52
PVT1-219ENST00000523427 AP2B1P63010 937 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 OASLQ15646 514 aaKnown RBP24.55■■□□□ 1.52
PVT1-219ENST00000523427 BTBD16Q32M84 506 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 MINDY4Q4G0A6 757 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 TMEM205Q6UW68 189 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 LANCL3Q6ZV70 420 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 CCDC89Q8N998 374 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 MAGED4Q96JG8 741 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 OR2A5Q96R48 311 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 PANX2Q96RD6 677 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 TGIF2Q9GZN2 237 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 CRYL1Q9Y2S2 319 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 DCHS2Q6V1P9 2916 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 CELSR1Q9NYQ6 3014 aa24.55■■□□□ 1.52
PVT1-219ENST00000523427 SETD2Q9BYW2 2564 aaPredicted RBP24.54■■□□□ 1.52
PVT1-219ENST00000523427 SMSP52788 366 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 ACSBG2Q5FVE4 666 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 GARNL3Q5VVW2 1013 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 ICE2Q659A1 982 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 ZNF295-AS1Q8N0V1 137 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 SHISA5Q8N114 240 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 BEST3Q8N1M1 668 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 PKP4Q99569 1192 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 HES7Q9BYE0 225 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 TREX1Q9NSU2 369 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 UTP6Q9NYH9 597 aaKnown RBP24.54■■□□□ 1.52
PVT1-219ENST00000523427 GALPQ9UBC7 116 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms