RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 SH3KBP1Q96B97 665 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 C11orf24Q96F05 449 aaPredicted RBP10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CCDC138Q96M89 665 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 VPS35Q96QK1 796 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CCM2Q9BSQ5 444 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FANCEQ9HB96 536 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SGK2Q9HBY8 427 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MARK1Q9P0L2 795 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 ATXN10Q9UBB4 475 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 FBXO10Q9UK96 956 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 EVPLLA8MZ36 301 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 KPNA3O00505 521 aaPredicted RBP10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SPINT1O43278 529 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MITFO75030 526 aaPredicted RBP10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 KCNK5O95279 499 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CPNE6O95741 557 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CATP04040 527 aaKnown RBP10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 IL1RNP18510 177 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 AGXTP21549 392 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MAGEA2P43356 314 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 STT3AP46977 705 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 TRPC1P48995 793 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 MAPK10P53779 464 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SRSF11Q05519 484 aaKnown RBP10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 CD47Q08722 323 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 DHCR24Q15392 516 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GRHL2Q6ISB3 625 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 GPR155Q7Z3F1 870 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 VTCN1Q7Z7D3 282 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 SERPINA11Q86U17 422 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 PTOV1Q86YD1 416 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 EGFL6Q8IUX8 553 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 IL23AQ9NPF7 189 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 LRRK1Q38SD2 2015 aa10.4□□□□□ -0.74
RAB11FIP1-204ENST00000522774 H0YIV9 168 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 K7ESM1 405 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZNF701M0R085 212 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DIRAS1O95057 198 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CCNDBP1O95273 360 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 FGF19O95750 216 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CYP17A1P05093 508 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CISD3P0C7P0 127 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MATN1P21941 496 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 EMP3P54852 163 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TPD52P55327 224 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PIGFQ07326 219 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MYBPC3Q14896 1274 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 VMACQ2NL98 169 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 XAF1Q6GPH4 301 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CEP68Q76N32 757 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DCP2Q8IU60 420 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZNF555Q8NEP9 628 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GPR156Q8NFN8 814 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 MAGEB10Q96LZ2 347 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DOK1Q99704 481 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DKK3Q9UBP4 350 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SH2B3Q9UQQ2 575 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RUVBL1Q9Y265 456 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 INSL6Q9Y581 213 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 TCF20Q9UGU0 1960 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 LOC100130705A0A1B0GUX0 176 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 A0A1W2PPW3 197 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PLK4O00444 970 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 FOXD2O60548 495 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 EPN2O95208 641 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SOD1P00441 154 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HTR1AP08908 422 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DGKGP49619 791 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HNRNPFP52597 415 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GTF2H3Q13889 308 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DPY19L1Q2PZI1 675 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HKDC1Q2TB90 917 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 C6orf141Q5SZD1 244 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 CPZQ66K79 652 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 FKBP9P1Q75LS8 142 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GALNT5Q7Z7M9 940 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ARL10Q8N8L6 244 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 OR7G3Q8NG95 312 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 OR8J2Q8NGG1 315 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 OR56A3Q8NH54 315 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HUS1BQ8NHY5 278 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SPPL3Q8TCT6 385 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ATL1Q8WXF7 558 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 NEIL2Q969S2 332 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 DTNBP1Q96EV8 351 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PCM1Q15154 2024 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GABRR3A8MPY1 467 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 hCG_2039718K7EN88 272 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 QSOX1O00391 747 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 SCAMP2O15127 329 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 PRMT3O60678 531 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 NUDT7P0C024 238 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HLA-EP13747 358 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 GPX2P18283 190 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 HNF4AP41235 474 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 ZNF658BQ4V348 819 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 FGD3Q5JSP0 725 aa10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 RBM48Q5RL73 367 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP1-204ENST00000522774 BROXQ5VW32 411 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms