RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GPR174Q9BXC1 333 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 TPK1Q9H3S4 243 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 GPN1Q9HCN4 374 aaPredicted RBP15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 GALPQ9UBC7 116 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 A0A0D9SEW6 157 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 AHSGP02765 367 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 PER3P56645 1201 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 MEIOBQ8N635 442 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 LYARQ9NX58 379 aaKnown RBP15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 KCPQ6ZWJ8 1503 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF208O43345 1280 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 TRAPPC6AO75865 159 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 POLR2CP19387 275 aaPredicted RBP15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 NTSR1P30989 418 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 RAB33AQ14088 237 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 DPY19L3Q6ZPD9 716 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 AHSA2Q719I0 299 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 PDPRQ8NCN5 879 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 CCDC54Q8NEL0 328 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 KBTBD7Q8WVZ9 684 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 GPR22Q99680 433 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 YIPF4Q9BSR8 244 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 MS4A12Q9NXJ0 267 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 DNAJB9Q9UBS3 223 aa15.81■□□□□ 0.12
PCDHA3-201ENST00000522353 FAM149AA5PLN7 773 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 WRBO00258 174 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 TRMUO75648 421 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 RLN1P04808 185 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 CTSAP10619 480 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 POU2F1P14859 743 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 UMODL1-AS1Q8N2C9 162 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 TRAM1L1Q8N609 369 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 IL22RA1Q8N6P7 574 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 GLYATL1Q969I3 302 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 KIAA1191Q96A73 305 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 C11orf24Q96F05 449 aaPredicted RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 SLC2A6Q9UGQ3 507 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 GPR32O75388 356 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 MTRF1O75570 445 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 C9P02748 559 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 MT-ND1P03886 318 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 NRLP54845 237 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 EEFSECP57772 596 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 VLDLRP98155 873 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 DHCR24Q15392 516 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 C5orf22Q49AR2 442 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 PEX13Q92968 403 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 PDE7BQ9NP56 450 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 FZD4Q9ULV1 537 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 DUX1O43812 170 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 PCDHGA12O60330 932 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF217O75362 1048 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 HEXBP07686 556 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 GDI2P50395 445 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 HERC3Q15034 1050 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 CILP2Q8IUL8 1156 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 LINC00471Q8N535 108 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 ANKLE1Q8NAG6 615 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 CAPSLQ8WWF8 208 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 NODALQ96S42 347 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 DENND2DQ9H6A0 471 aaPredicted RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 C11orf16Q9NQ32 467 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 PIAS3Q9Y6X2 628 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 FAM240BA0A1B0GVZ2 78 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 LOC730098B7Z3J9 87 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 RNGTTO60942 597 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 GATBO75879 557 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 GSTM3P21266 225 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 PUM1Q14671 1186 aaKnown RBP eCLIP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 PDCD4Q53EL6 469 aaKnown RBP15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 CRB2Q5IJ48 1285 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 OLFML2AQ68BL7 652 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 LRRC46Q96FV0 321 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 CTPS2Q9NRF8 586 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 TVP23BQ9NYZ1 205 aa15.8■□□□□ 0.12
PCDHA3-201ENST00000522353 A0A1W2PQU0 124 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 STARP49675 285 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 OGDHQ02218 1023 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 HYAL2Q12891 473 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 GFOD2Q3B7J2 385 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 C14orf80Q86SX3 495 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 CAND1Q86VP6 1230 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 ZDHHC14Q8IZN3 488 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 ANXA2P2A6NMY6 339 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 MANBAO00462 879 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 ANXA2P07355 339 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 SYPP08247 313 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 MYCLP1P12525 358 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 SYT16Q17RD7 645 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 EMC10Q5UCC4 262 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 ZNF572Q7Z3I7 529 aaPredicted RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 NELL2Q99435 816 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 CPNE3O75131 537 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 OAZ2O95190 189 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 JUNP05412 331 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 NCK1P16333 377 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 C6orf52Q5T4I8 152 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 GEMIN6Q8WXD5 167 aaKnown RBP15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 COQ8BQ96D53 544 aa15.79■□□□□ 0.12
PCDHA3-201ENST00000522353 SAGE2PA6NJ88 616 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms