RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 IL17FQ96PD4 163 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PANX2Q96RD6 677 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 GPR63Q9BZJ6 419 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 MIS12Q9H081 205 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PDCL3Q9H2J4 239 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 FBXO44Q9H4M3 255 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 HAUS4Q9H6D7 363 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF334Q9HCZ1 680 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CNGB3Q9NQW8 809 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 ASAH2Q9NR71 780 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TLR8Q9NR97 1041 aaKnown RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 HCFC1R1Q9NWW0 138 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 TMEM160Q9NX00 188 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 MDFICQ9P1T7 246 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 MALT1Q9UDY8 824 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 NDRG3Q9UGV2 375 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CHORDC1Q9UHD1 332 aaPredicted RBP3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CYTH4Q9UIA0 394 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 SCML2Q9UQR0 700 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 PCDHGB5Q9Y5G0 923 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 CLUHO75153 1309 aa3.18□□□□□ -1.9
VPS13B-209ENST00000521559 MICAL3Q7RTP6 2002 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 A0A087X0T9 212 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TRAV19A0A0A6YYK7 116 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 A0A0B4J293 547 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 SH2D7A6NKC9 451 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 A6NLC8 198 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 PRSS47A8MTI9 375 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 HMGB1P1B2RPK0 211 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 WNT9BO14905 357 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TIMM23O14925 209 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 PAPSS1O43252 624 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 RTN2O75298 545 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TIPRLO75663 272 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NDUFB4O95168 129 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 PLEKP08567 350 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ZDHHC11BP0C7U3 371 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 FAM228BP0C875 321 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 RALAP11233 206 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GZMAP12544 262 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 LAMP2P13473 410 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GJA1P17302 382 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GABRR2P28476 465 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 CDC25CP30307 473 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 CCR2P41597 374 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 PAFAH1B1P43034 410 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NSFP46459 744 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GABRB2P47870 512 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 PGFP49763 221 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 DLX5P56178 289 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GSDMDP57764 484 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 DAOAP59103 153 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 YWHAGP61981 247 aaKnown RBP eCLIP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 MRPS5P82675 430 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ACSM2AQ08AH3 577 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GOLGA8DPQ0D2H9 430 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ADIGQ0VDE8 80 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TEAD2Q15562 447 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GPR68Q15743 365 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ASTE1Q2TB18 679 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 HECTD3Q5T447 861 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 BSPRYQ5W0U4 402 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 OR6B2Q6IFH4 312 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NAPEPLDQ6IQ20 393 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 RHBDF2Q6PJF5 856 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 WDR59Q6PJI9 974 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 UNQ6126/PRO20091Q6UXV3 157 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 RRM2BQ7LG56 351 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 SHFQ7M4L6 423 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 CCDC186Q7Z3E2 898 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TADA2BQ86TJ2 420 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 HEATR4Q86WZ0 1026 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 LURAP1LQ8IV03 231 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 MCOLN2Q8IZK6 566 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NAGSQ8N159 534 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 SIX6OS1Q8N1H7 587 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ZBTB8BQ8NAP8 495 aaPredicted RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 POC1AQ8NBT0 407 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 SPC24Q8NBT2 197 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NEXN-AS1Q8NBZ9 246 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ZNF114Q8NC26 417 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 MSANTD4Q8NCY6 345 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 C1orf131Q8NDD1 294 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 STKLD1Q8NE28 680 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 PPHLN1Q8NEY8 458 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 OLIG1Q8TAK6 271 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 WFIKKN2Q8TEU8 576 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 RAB40AQ8WXH6 277 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 NDRG1Q92597 394 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 ANP32BQ92688 251 aaKnown RBP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 HTRA1Q92743 480 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 FGF13Q92913 245 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TCEAL4Q96EI5 215 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 GCNAQ96QF7 691 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 MYADMQ96S97 322 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 CPXM1Q96SM3 734 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 CHP1Q99653 195 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.17□□□□□ -1.9
VPS13B-209ENST00000521559 TRIM62Q9BVG3 475 aa3.17□□□□□ -1.9
VPS13B-209ENST00000521559 PHF7Q9BWX1 381 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms