RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TYMPP19971 482 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 CYP2A7P20853 494 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 ELAVL4P26378 380 aaKnown RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 MARK3P27448 753 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 ATP6V1E1P36543 226 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 SULT2A1Q06520 285 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 EXT1Q16394 746 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 ODF4Q2M2E3 257 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZC2HC1CQ53FD0 456 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 SIRPB2Q5JXA9 342 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 AGAP6Q5VW22 663 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 UNQ6126/PRO20091Q6UXV3 157 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 FOXL2NBQ6ZUU3 175 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 KCTD8Q6ZWB6 473 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 CREB3L2Q70SY1 520 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 C5orf24Q7Z6I8 188 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 SERPINA12Q8IW75 414 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 LGI2Q8N0V4 545 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 EID3Q8N140 333 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 NAGSQ8N159 534 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 Q8N9P0 234 aaPredicted RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 LMNTD1Q8N9Z9 388 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR52E1Q8NGJ3 308 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 THOC1Q96FV9 657 aaKnown RBP3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZNF559Q9BR84 538 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 CDK19Q9BWU1 502 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZMYND12Q9H0C1 365 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 TSPYL1Q9H0U9 437 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 HSD3B7Q9H2F3 369 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 EVA1AQ9H8M9 152 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 RNPEPL1Q9HAU8 725 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 GPR173Q9NS66 373 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 COMMD8Q9NX08 183 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 NINJ2Q9NZG7 142 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 MALT1Q9UDY8 824 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 IL19Q9UHD0 177 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 STUB1Q9UNE7 303 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 CECR2Q9BXF3 1484 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 PFASO15067 1338 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 KIAA1217Q5T5P2 1943 aa3.13□□□□□ -1.91
HMGN1P28-201ENST00000521340 SAA2-SAA4A0A096LPE2 208 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 C13orf42A0A1B0GVH6 325 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 NPIPA3F8WFD2 350 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 ATP6V0E1O15342 81 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 PRKRAO75569 313 aaKnown RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 RPS6KA5O75582 802 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 PCP11498 1178 aaKnown RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 LIFP15018 202 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 PIK3R1P27986 724 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 CASP9P55211 416 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 FOXG1P55316 489 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 RPS18P62269 152 aaKnown RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 KLC1Q07866 573 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 TEFQ10587 303 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 P2RY6Q15077 328 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 EPC2Q52LR7 807 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC25A53Q5H9E4 307 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 TECRLQ5HYJ1 363 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 FAM46CQ5VWP2 391 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 PM20D1Q6GTS8 502 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 UGT3A1Q6NUS8 523 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZCCHC12Q6PEW1 402 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SIGLEC15Q6ZMC9 328 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 FAM43BQ6ZT52 329 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 MARK2Q7KZI7 788 aaKnown RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SMIM29Q86T20 159 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC9B2Q86UD5 537 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZNF410Q86VK4 478 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 LAX1Q8IWV1 398 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 PEX5LQ8IYB4 626 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 MRPL43Q8N983 215 aaKnown RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 KLHDC9Q8NEP7 349 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRIM58Q8NG06 486 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 CD99L2Q8TCZ2 262 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 ST7LQ8TDW4 575 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 CKAP2Q8WWK9 683 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 FCAMRQ8WWV6 532 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 FAM46BQ96A09 425 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 PYCR2Q96C36 320 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SENP5Q96HI0 755 aaPredicted RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 RBM41Q96IZ5 413 aaKnown RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SPATA13Q96N96 652 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 TSSK2Q96PF2 358 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZNF577Q9BSK1 485 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SPXQ9BT56 116 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 C1QTNF4Q9BXJ3 329 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 WWTR1Q9GZV5 400 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 TNMDQ9H2S6 317 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SNX25Q9H3E2 840 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 CPVLQ9H3G5 476 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 KCNMB3Q9NPA1 279 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 FGF21Q9NSA1 209 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 ANO10Q9NW15 660 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 HMG20BQ9P0W2 317 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRMT6Q9UJA5 497 aaKnown RBP3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 GMEB2Q9UKD1 530 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 POU2F3Q9UKI9 436 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 FBXW2Q9UKT8 454 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC7A7Q9UM01 511 aa3.12□□□□□ -1.91
HMGN1P28-201ENST00000521340 RPH3AQ9Y2J0 694 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms