RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 E2F5Q15329 346 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 CDO1Q16878 200 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 FFAR4Q5NUL3 377 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 C20orf194Q5TEA3 1177 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 ZC2HC1BQ5TFG8 222 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 NOTUMQ6P988 496 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 CYB5D1Q6P9G0 228 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 OTOAQ7RTW8 1153 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 NOA1Q8NC60 698 aaKnown RBP4.29□□□□□ -1.72
PTPN12-214ENST00000520947 GDAP1Q8TB36 358 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 HCAR2Q8TDS4 363 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 DNASE1L2Q92874 299 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 RIT1Q92963 219 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 PYCR2Q96C36 320 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 BSCL2Q96G97 398 aaPredicted RBP4.29□□□□□ -1.72
PTPN12-214ENST00000520947 MAP3K3Q99759 626 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 MLPHQ9BV36 600 aaPredicted RBP4.29□□□□□ -1.72
PTPN12-214ENST00000520947 PANK2Q9BZ23 570 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 CPVLQ9H3G5 476 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 ITGA11Q9UKX5 1188 aa4.29□□□□□ -1.72
PTPN12-214ENST00000520947 A4D1N5 150 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 IFIT3O14879 490 aaKnown RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 ST8SIA3O43173 380 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 ZNF821O75541 412 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 BAG3O95817 575 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 CLPTM1O96005 669 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 RLN1P04808 185 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 EDN1P05305 212 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 STAG3L1P0CL83 205 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 TMEM187Q14656 261 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 TWISTNBQ3B726 338 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 ARHGEF16Q5VV41 709 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 BTNL8Q6UX41 500 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 ANKRD33Q7Z3H0 272 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 PIWIL3Q7Z3Z3 882 aaKnown RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 KIRREL3Q8IZU9 778 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 GPATCH11Q8N954 259 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 UXS1Q8NBZ7 420 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 OR13C3Q8NGS6 347 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 SEPT1Q8WYJ6 367 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 P2RX5Q93086 422 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 VMP1Q96GC9 406 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 ART5Q96L15 291 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 PARK7Q99497 189 aaKnown RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 PIGQQ9BRB3 760 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 COPS7BQ9H9Q2 264 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 CHST11Q9NPF2 352 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 ARMCX3Q9UH62 379 aaPredicted RBP4.28□□□□□ -1.72
PTPN12-214ENST00000520947 CHKBQ9Y259 395 aa4.28□□□□□ -1.72
PTPN12-214ENST00000520947 A0A0U1RQK1 487 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 ZNF320A2RRD8 509 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 O00370 1275 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 SLC30A4O14863 429 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 FLRT2O43155 660 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 TRMUO75648 421 aaKnown RBP4.27□□□□□ -1.73
PTPN12-214ENST00000520947 FAM157CP0CG43 387 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 GP1BBP13224 206 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 CEACAM1P13688 526 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 ZNF26P17031 533 aaPredicted RBP4.27□□□□□ -1.73
PTPN12-214ENST00000520947 EPORP19235 508 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 LHCGRP22888 699 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 CDX1P47902 265 aaPredicted RBP4.27□□□□□ -1.73
PTPN12-214ENST00000520947 TAF6P49848 677 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 HERV-K104P61576 105 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 YWHAHQ04917 246 aaPredicted RBP4.27□□□□□ -1.73
PTPN12-214ENST00000520947 TRAP1Q12931 704 aaKnown RBP4.27□□□□□ -1.73
PTPN12-214ENST00000520947 MEP1BQ16820 701 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 ZFP69Q49AA0 526 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 GPR33Q49SQ1 333 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 GTDC1Q4AE62 458 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 XKR6Q5GH73 641 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 LYSMD4Q5XG99 296 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 FAM166AQ6J272 317 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 UGT3A1Q6NUS8 523 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 C11orf88Q6PI97 169 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 HOOK3Q86VS8 718 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 AMIGO1Q86WK6 493 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 ATAD1Q8NBU5 361 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 DDHD1Q8NEL9 900 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 OR2T11Q8NH01 316 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 PGM2Q96G03 612 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 NDNQ99608 321 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 ACTL8Q9H568 366 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 RAB9BQ9NP90 201 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 PKD2L2Q9NZM6 624 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 SEPT10Q9P0V9 454 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 CDH7Q9ULB5 785 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 R4GN57 208 aa4.27□□□□□ -1.73
PTPN12-214ENST00000520947 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 YDJCA8MPS7 323 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 FPGTO14772 594 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 ANKRD34CP0C6C1 535 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 TCF7P36402 384 aaPredicted RBP4.26□□□□□ -1.73
PTPN12-214ENST00000520947 KCNJ10P78508 379 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 CACNG1Q06432 222 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 ITGA9Q13797 1035 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 EXT1Q16394 746 aa4.26□□□□□ -1.73
PTPN12-214ENST00000520947 PDLIM3Q53GG5 364 aaPredicted RBP4.26□□□□□ -1.73
PTPN12-214ENST00000520947 CTR9Q6PD62 1173 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms