RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 POLE4Q9NR33 117 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ERVW-1Q9UQF0 538 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 MRPS33Q9Y291 106 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ABHD14A-ACY1A0A1B0GW23 586 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 GJB5O95377 273 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 MATN4O95460 622 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 IFNW1P05000 195 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 HAPLN1P10915 354 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 MATN1P21941 496 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 VARSP26640 1264 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ARCN1P48444 511 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 IST1P53990 364 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ILF3Q12906 894 aaKnown RBP eCLIP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 C6orf136Q5SQH8 315 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ERICH5Q6P6B1 374 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAMDC4Q6UXC1 1216 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 TAF8Q7Z7C8 310 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 MFSD6LQ8IWD5 586 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR10T2Q8NGX3 314 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 HERC2P3Q9BVR0 1158 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 TRIT1Q9H3H1 467 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 TREX1Q9NSU2 369 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 INPPL1O15357 1258 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 LDB2O43679 373 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 SAGP10523 405 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 LAMP2P13473 410 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 NT5EP21589 574 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 GSTM2P28161 218 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 NFKB2Q00653 900 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 TRIM71Q2Q1W2 868 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 MINDY4Q4G0A6 757 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 COLEC12Q5KU26 742 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 GCNT6Q5T4J0 391 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 DUS1LQ6P1R4 473 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 PIWIL3Q7Z3Z3 882 aaKnown RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 AMZ2Q86W34 360 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 TTC29Q8NA56 475 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 CNIH3Q8TBE1 160 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 DERL2Q9GZP9 239 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLITRK2Q9H156 845 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 NME7Q9Y5B8 376 aa10.55□□□□□ -0.72
PCDHGA1-202ENST00000517417 EFCAB9A8MZ26 197 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 AIREO43918 545 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 CAPN15O75808 1086 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 ACP5P13686 325 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 STC1P52823 247 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 ADAM17P78536 824 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 COQ5Q5HYK3 327 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 PM20D1Q6GTS8 502 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF730Q6ZMV8 503 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 HDDC2Q7Z4H3 204 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 SERINC5Q86VE9 423 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRSS58Q8IYP2 241 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 IMP4Q96G21 291 aaKnown RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR78Q96P69 363 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 R3HDMLQ9H3Y0 253 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 FAM118AQ9NWS6 357 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZSCAN32Q9NX65 697 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 PPIEQ9UNP9 301 aaKnown RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 MYADML2A6NDP7 307 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 CCNKO75909 580 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 ITGBL1O95965 494 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 CD36P16671 472 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 FDXRP22570 491 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 SNAPC1Q16533 368 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR135Q8IZ08 494 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 HDDC3Q8N4P3 179 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 DNASE1L2Q92874 299 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 PPP1R14AQ96A00 147 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 TDP1Q9NUW8 608 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 RUVBL1Q9Y265 456 aaKnown RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMA7Q9Y2S6 64 aaKnown RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAGED1Q9Y5V3 778 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 PI15O43692 258 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 PGLSO95336 258 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 GALTP07902 379 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 RGS8P57771 180 aaPredicted RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 SERINC3Q13530 473 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 LAPTM4AQ15012 233 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 SYT16Q17RD7 645 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 C6orf183Q5T699 404 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 FUNDC1Q8IVP5 155 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 KCT2Q8NC54 265 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 FAR1Q8WVX9 515 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 TP53INP1Q96A56 240 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 DUSP26Q9BV47 211 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAGEE1Q9HCI5 957 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZDHHC3Q9NYG2 299 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 LCHNA4D1U4 455 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 KRBA1A5PL33 1030 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 INMTO95050 263 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAP2K4P45985 399 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 HEPACAMQ14CZ8 416 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 NDUFA5Q16718 116 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 HKDC1Q2TB90 917 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 CYBRD1Q53TN4 286 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 SRFBP1Q8NEF9 429 aaKnown RBP10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF385DQ9H6B1 395 aa10.54□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMED5Q9Y3A6 229 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms