RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 LEF1Q9UJU2 399 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-557P-201ENST00000516842 PILRAQ9UKJ1 303 aa-0.65□□□□□ -2.51
RNU6-557P-201ENST00000516842 MRPL11Q9Y3B7 192 aaKnown RBP-0.65□□□□□ -2.51
RNU6-557P-201ENST00000516842 SCINQ9Y6U3 715 aa-0.65□□□□□ -2.51
RNU6-557P-201ENST00000516842 COL27A1Q8IZC6 1860 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-557P-201ENST00000516842 FAM237AA0A1B0GTK4 181 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 LGALS16A8MUM7 142 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 H3BQ06 376 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 PEX12O00623 359 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 OVOL1O14753 267 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 SMAD9O15198 467 aaKnown RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 ANP32CO43423 234 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 RFPL1O75677 317 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 WDHD1O75717 1129 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 URODP06132 367 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 RPA1P27694 616 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 GNAQP50148 359 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 GPR143P51810 404 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 SUCLG1P53597 346 aaKnown RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 FOXO1Q12778 655 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 MADCAM1Q13477 382 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 ABRAXAS2Q15018 415 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 PDLIM3Q53GG5 364 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 MDH1BQ5I0G3 518 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 GCNT6Q5T4J0 391 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 GRTP1Q5TC63 336 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 TMEM81Q6P7N7 255 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 R3HCC1LQ7Z5L2 792 aaKnown RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 GALNT13Q8IUC8 556 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 AFAP1Q8N556 730 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 TRIML1Q8N9V2 468 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 BRI3BPQ8WY22 251 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 SPATA17Q96L03 361 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 CDH19Q9H159 772 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 SPC25Q9HBM1 224 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 G6PC2Q9NQR9 355 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 FAM207AQ9NSI2 230 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 ALKBH4Q9NXW9 302 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 OPN4Q9UHM6 478 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 HACL1Q9UJ83 578 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 AAR2Q9Y312 384 aaKnown RBP-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 CHD4Q14839 1912 aa-0.66□□□□□ -2.52
RNU6-557P-201ENST00000516842 ENO4A6NNW6 628 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZNF487B1APH4 448 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 OR6B1O95007 311 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 RETP07949 1114 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 MYOGP15173 224 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 PGAM2P15259 253 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 CD1DP15813 335 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 UGT1A6P19224 532 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 EDNRAP25101 427 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 RPS9P46781 194 aaKnown RBP-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 FNTAP49354 379 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 PDX1P52945 283 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZNF45Q02386 682 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 MVPQ14764 893 aaKnown RBP-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 PRR4Q16378 134 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 CCL14Q16627 93 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 MEP1AQ16819 746 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 ARMCX4Q5H9R4 360 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 TOR1AIP1Q5JTV8 583 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 LINGO4Q6UY18 593 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 RINLQ6ZS11 566 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 MCM10Q7L590 875 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 TTC5Q8N0Z6 440 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 GPR137CQ8N3F9 429 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 C11orf65Q8NCR3 313 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 GSDMBQ8TAX9 411 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 TRIM63Q969Q1 353 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZBED6CLQ96FA7 236 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 CASD1Q96PB1 797 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 SPIN2AQ99865 258 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 SPIN2BQ9BPZ2 258 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 CCDC3Q9BQI4 270 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 RIOK1Q9BRS2 568 aaKnown RBP-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 STRADBQ9C0K7 418 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 TMEM39BQ9GZU3 492 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 ZBP1Q9H171 429 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 SPNS1Q9H2V7 528 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 KIF9Q9HAQ2 790 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 RETNQ9HD89 108 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 KLHL21Q9UJP4 597 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 A4GNTQ9UNA3 340 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 STUB1Q9UNE7 303 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 CA5BQ9Y2D0 317 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 GDAQ9Y2T3 454 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 MRPS18CQ9Y3D5 142 aaKnown RBP-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 CACNG2Q9Y698 323 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 DGKBQ9Y6T7 804 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 BAHCC1Q9P281 2608 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 UTYO14607 1347 aa-0.67□□□□□ -2.52
RNU6-557P-201ENST00000516842 CFAP65Q6ZU64 1925 aaKnown RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 RRN3P2A6NIE6 340 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 E9PSI1 815 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 F8VVB4 439 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 F8VWA3 439 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 RTCAO00442 366 aaKnown RBP-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 E2F3O00716 465 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 ALDH1L1O75891 902 aa-0.68□□□□□ -2.52
RNU6-557P-201ENST00000516842 MRPL3P09001 348 aaKnown RBP-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms