RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ZC3HAV1LQ96H79 300 aaKnown RBP7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ACOX2Q99424 681 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 B3GNT4Q9C0J1 378 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PDFQ9HBH1 243 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PKD2L2Q9NZM6 624 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 DEC1Q9P2X7 70 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 LAMP5Q9UJQ1 280 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PRELID1Q9Y255 219 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 PTGDR2Q9Y5Y4 395 aa7.2□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF99A8MXY4 864 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 GIPC1O14908 333 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 GALNSP34059 522 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 NUDT1P36639 197 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CD86P42081 329 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 PIK3CBP42338 1070 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 HK3P52790 923 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 SP140Q13342 867 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 TOP3AQ13472 1001 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF79Q15937 498 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 TBCELQ5QJ74 424 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 HFE2Q6ZVN8 426 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 ETFBKMTQ8IXQ9 262 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 ADGRG2Q8IZP9 1017 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 FBXL6Q8N531 539 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 FAM3CQ92520 227 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 MCCC1Q96RQ3 725 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 P2RY13Q9BPV8 354 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 C19orf43Q9BQ61 176 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 TP63Q9H3D4 680 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 HPS4Q9NQG7 708 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 PCTPQ9UKL6 214 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 SCML1Q9UN30 329 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 ACOT9Q9Y305 439 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 RNF215Q9Y6U7 377 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 PIAS3Q9Y6X2 628 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 PHGDHO43175 533 aaKnown RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 MTSS1O43312 755 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 MYO1DO94832 1006 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 SERPINF2P08697 491 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 THRBP10828 461 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CHRNB1P11230 501 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 PCNAP12004 261 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 HOXB6P17509 224 aaKnown RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 NFKB1P19838 968 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CNR2P34972 360 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 KRT20P35900 424 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 SEPT6Q14141 434 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 RABL3Q5HYI8 236 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CPZQ66K79 652 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CYP2R1Q6VVX0 501 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CLYBLQ8N0X4 340 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF786Q8N393 782 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CAMKK1Q8N5S9 505 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 OR4C15Q8NGM1 316 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 ZNF669Q96BR6 464 aaPredicted RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 RPL10LQ96L21 214 aaKnown RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CCDC138Q96M89 665 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 TMEM74Q96NL1 305 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 RBM14Q96PK6 669 aaKnown RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 ZYG11BQ9C0D3 744 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CHRDQ9H2X0 955 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 C12orf10Q9HB07 376 aa7.19□□□□□ -1.26
CLIP1-205ENST00000514271 IARS2Q9NSE4 1012 aaKnown RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 INTS7Q9NVH2 962 aaKnown RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 CDV3Q9UKY7 258 aaKnown RBP7.19□□□□□ -1.26
CLIP1-205ENST00000514271 A0A075B6Q4 140 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ILVBLA1L0T0 632 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 FAM234BA2RU67 622 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 VPS4BO75351 444 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 BCL10O95999 233 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 LTA4HP09960 611 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 UBL4AP11441 157 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 POLR2EP19388 210 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 GJA4P35212 333 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 DCTP40126 519 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 GAS1P54826 345 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MVKQ03426 396 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CLCQ05315 142 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 HYAL2Q12891 473 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 POU6F1Q14863 301 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PIK3R6Q5UE93 754 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 AGAP6Q5VW22 663 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 SULT1C3Q6IMI6 304 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ESRP1Q6NXG1 681 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MZT2AQ6P582 158 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 NLRP8Q86W28 1048 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 HID1Q8IV36 788 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 RDH10Q8IZV5 341 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CLEC4FQ8N1N0 589 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PRR7Q8TB68 274 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 ARRDC2Q8TBH0 407 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 APOBEC4Q8WW27 367 aaKnown RBP7.18□□□□□ -1.26
CLIP1-205ENST00000514271 NRBF2Q96F24 287 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MS4A3Q96HJ5 214 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 AGAP4Q96P64 663 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PPP1R2P1Q96PQ5 205 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CHID1Q9BWS9 393 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 MFRPQ9BY79 579 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 CEP44Q9C0F1 390 aa7.18□□□□□ -1.26
CLIP1-205ENST00000514271 PCED1AQ9H1Q7 454 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms