RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	SDCBP2	Q9H190	292 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	UBQLN3	Q9H347	655 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RIMS4	Q9H426	269 aa	Predicted RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TLE6	Q9H808	572 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FKRP	Q9H9S5	495 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MRPL17	Q9NRX2	175 aa	Known RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	UBQLN2	Q9UHD9	624 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZDHHC2	Q9UIJ5	367 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC7A7	Q9UM01	511 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	AURKC	Q9UQB9	309 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	FOXA2	Q9Y261	457 aa	Predicted RBP	4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF510	Q9Y2H8	683 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CLCA3P	Q9Y6N3	262 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PFAS	O15067	1338 aa		4.64	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TRAV18	A0A075B6X5	111 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CTAGE9	A4FU28	777 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ANKRD61	A6NGH8	418 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ARHGAP42	A6NI28	874 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	C4orf47	A7E2U8	309 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KRTAP9-7	A8MTY7	169 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PROB1	E7EW31	1015 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NPIPA3	F8WFD2	350 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TLR4	O00206	839 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RASGRF2	O14827	1237 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SOCS5	O75159	536 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PAPSS2	O95340	614 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TOMM40	O96008	361 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CRYAB	P02511	175 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CTAGE8	P0CG41	777 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DLAT	P10515	647 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF12	P17014	697 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	UGT1A6	P19224	532 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CDH3	P22223	829 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CCKBR	P32239	447 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ABCG1	P45844	678 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GLIPR1	P48060	266 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TUBA1B	P68363	451 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TAF10	Q12962	218 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TAF7	Q15545	349 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CCDC40	Q4G0X9	1142 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	C12orf60	Q5U649	245 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GALNT17	Q6IS24	598 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CTR9	Q6PD62	1173 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	B3GLCT	Q6Y288	498 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SIGLEC15	Q6ZMC9	328 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DBX2	Q6ZNG2	339 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RBM43	Q6ZSC3	357 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	IL17REL	Q6ZVW7	336 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	C1orf186	Q6ZWK4	172 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RTN4RL2	Q86UN3	420 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CTAGE4	Q8IX94	777 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ELMOD2	Q8IZ81	293 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	OR1J1	Q8NGS3	322 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TMEM186	Q96B77	213 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ADGRG7	Q96K78	797 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	NSMCE2	Q96MF7	247 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TRMT61B	Q9BVS5	477 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SLC39A8	Q9C0K1	460 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	DDX47	Q9H0S4	455 aa	Known RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	A4GALT	Q9NPC4	353 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KCNN3	Q9UGI6	736 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PCDHA7	Q9UN72	937 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	STUB1	Q9UNE7	303 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	AP1M2	Q9Y6Q5	423 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TRIP12	Q14669	1992 aa	Predicted RBP	4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ATP8B3	O60423	1300 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CGNL1	Q0VF96	1302 aa		4.63	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	MAGEB16	A2A368	324 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	WDR91	A4D1P6	747 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CFAP73	A6NFT4	308 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ANKDD1B	A6NHY2	528 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	C2orf81	A6NN90	581 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006		K7EPI3	171 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SYNGR3	O43761	229 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SCO2	O43819	266 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	BAG4	O95429	457 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	CXCL14	O95715	111 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	GAS8	O95995	478 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TGFA	P01135	160 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	HEXB	P07686	556 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ELAVL4	P26378	380 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RPA1	P27694	616 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	EPHA2	P29317	976 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SFTPD	P35247	375 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ASMT	P46597	345 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SRP54	P61011	504 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	RPL24	P83731	157 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KLHL30	Q0D2K2	578 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	TRAP1	Q12931	704 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	PPP1R8	Q12972	351 aa	Known RBP	4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ABR	Q12979	859 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	STXBP5	Q5T5C0	1151 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	KLHL10	Q6JEL2	608 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ZCCHC12	Q6PEW1	402 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	SYCE2	Q6PIF2	218 aa		4.62	□□□□□ -1.67
CALCOCO2-222	ENST00000514006	ABRAXAS1	Q6UWZ7	409 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms