RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 MAGEA6P43360 314 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF81P51508 661 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 RPP38P78345 283 aaKnown RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 RPL6Q02878 288 aaKnown RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 GRSF1Q12849 480 aaKnown RBP eCLIP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 PON2Q15165 354 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 HSD17B12Q53GQ0 312 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 C6orf136Q5SQH8 315 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 CADM3Q8N126 398 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF655Q8N720 491 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 HHIPL1Q96JK4 782 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 RIPOR3Q96MK2 946 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 WACQ9BTA9 647 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 MND1Q9BWT6 205 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 DPAGT1Q9H3H5 408 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 RANBP3Q9H6Z4 567 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 INTS7Q9NVH2 962 aaKnown RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 TVP23BQ9NYZ1 205 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 UBQLN2Q9UHD9 624 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 INSL6Q9Y581 213 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 NWD2Q9ULI1 1742 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 A0A1B0GVM2 712 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 TNFRSF10AO00220 468 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ACRP10323 421 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 CXCR2P25025 360 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 CDK5R2Q13319 367 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ADAM15Q13444 863 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 IDNKQ5T6J7 187 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 SIDT2Q8NBJ9 832 aaKnown RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 LSM14AQ8ND56 463 aaKnown RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 HYLS1Q96M11 299 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 SLC39A8Q9C0K1 460 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ZFYVE1Q9HBF4 777 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 AIG1Q9NVV5 245 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 INTS6Q9UL03 887 aaKnown RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 GLI3P10071 1580 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 H7C2Y5 167 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 AP3D1O14617 1153 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 DNTTP04053 509 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ACSL1P33121 698 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 CASP3P42574 277 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 MAGEA2P43356 314 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 C1QTNF8P60827 252 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 HMGCS1Q01581 520 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ABRQ12979 859 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ALFQ53S48 1182 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 CERS6Q6ZMG9 384 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ARL14EPQ8N8R7 260 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 VANGL1Q8TAA9 524 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 FUBP3Q96I24 572 aaKnown RBP eCLIP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 MAPKAP1Q9BPZ7 522 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 SIAEQ9HAT2 523 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 EVLQ9UI08 416 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-211ENST00000513346 NUP50Q9UKX7 468 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 GTF2A1LQ9UNN4 478 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 PLCL2Q9UPR0 1127 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 PRKAB1Q9Y478 270 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 CLCA3PQ9Y6N3 262 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 ACOT8O14734 319 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 OR5F1O95221 314 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 NFATC1O95644 943 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 BMP7P18075 431 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 OXTRP30559 389 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 UNC50Q53HI1 259 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 C10orf62Q5T681 223 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 C1QTNF12Q5T7M4 302 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SYPL2Q5VXT5 272 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CEP97Q8IW35 865 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CADM2Q8N3J6 435 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 KIAA1191Q96A73 305 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SNX18Q96RF0 628 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SLC30A3Q99726 388 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PIGVQ9NUD9 493 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SIX4Q9UIU6 781 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ENTPD4Q9Y227 616 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 TMEM98Q9Y2Y6 226 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 MRPS14O60783 128 aaKnown RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ESR1P03372 595 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 C8AP07357 584 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GADD45AP24522 165 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PBX3P40426 434 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 MAPKAPK2P49137 400 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GALNT1Q10472 559 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SPANXN4Q5MJ08 99 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SMYD5Q6GMV2 418 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 LINGO4Q6UY18 593 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 UBE2R2Q712K3 238 aaPredicted RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 OR7D4Q8NG98 312 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SNAPC3Q92966 411 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 MED30Q96HR3 178 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 ZFP3Q96NJ6 502 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 MGLLQ99685 303 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GON7Q9BXV9 100 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 SEMA3GQ9NS98 782 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 NUFIP1Q9UHK0 495 aaKnown RBP10.94□□□□□ -0.66
TCOF1-211ENST00000513346 CDH7Q9ULB5 785 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 GABRQQ9UN88 632 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 PCDHGA8Q9Y5G5 932 aa10.94□□□□□ -0.66
TCOF1-211ENST00000513346 RAI2Q9Y5P3 530 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms