RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 UNC5DQ6UXZ4 953 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 TTLL10Q6ZVT0 673 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 OVCH1Q7RTY7 1134 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 HDXQ7Z353 690 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 PPP1R32Q7Z5V6 425 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 MCATQ8IVS2 390 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 SLC22A15Q8IZD6 547 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 TAB3Q8N5C8 712 aaPredicted RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 CCDC89Q8N998 374 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 TTC29Q8NA56 475 aaPredicted RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 ACRBPQ8NEB7 543 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 PPHLN1Q8NEY8 458 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 OR52K1Q8NGK4 314 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 OR13J1Q8NGT2 312 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 SNRNP40Q96DI7 357 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 NRTNQ99748 197 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 BAG1Q99933 345 aaPredicted RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 WDR54Q9H977 334 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 MRM3Q9HC36 420 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 AGPAT4Q9NRZ5 378 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 PIH1D1Q9NWS0 290 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 LUZP4Q9P127 313 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 NXT1Q9UKK6 140 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 PLAGL1Q9UM63 463 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 ZNF148Q9UQR1 794 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 R3HDM2Q9Y2K5 976 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 REXO2Q9Y3B8 237 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 COPG1Q9Y678 874 aaKnown RBP6.89□□□□□ -1.31
USP46-208ENST00000512656 SHANK1Q9Y566 2161 aa6.89□□□□□ -1.31
USP46-208ENST00000512656 PIKFYVEQ9Y2I7 2098 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 TNRC6AQ8NDV7 1962 aaKnown RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 ANKUB1A6NFN9 424 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 TARM1B6A8C7 271 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 AP3B1O00203 1094 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 PRMT5O14744 637 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 RASGRF2O14827 1237 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 DSCR3O14972 297 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 PFDN6O15212 129 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 OR1I1O60431 355 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 SRPX2O60687 465 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 SEMA7AO75326 666 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 FBXO24O75426 580 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 GPC4O75487 556 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 SLCO2B1O94956 709 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 ONECUT2O95948 504 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 FTCDO95954 541 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 IFNB1P01574 187 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 TPBGLP0DKB5 382 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 MAGP20916 626 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 CD9P21926 228 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 CCR7P32248 378 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 CCNFP41002 786 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 RPS26P62854 115 aaKnown RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 ACVR1Q04771 509 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 MRPL49Q13405 166 aaKnown RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 SLC9A5Q14940 896 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 SF1Q15637 639 aaKnown RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 PLEKHN1Q494U1 663 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 AGAP7PQ5VUJ5 663 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 PRAMEF13Q5VWM6 474 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 PTRHD1Q6GMV3 140 aaKnown RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 FIGLAQ6QHK4 219 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 C4orf22Q6V702 233 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 RAD9BQ6WBX8 426 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 NAPRTQ6XQN6 538 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 MAMDC2Q7Z304 686 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 LRRC6Q86X45 466 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 MPP5Q8N3R9 675 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 CISD2Q8N5K1 135 aaKnown RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 RNF10Q8N5U6 811 aaKnown RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 OR2L8Q8NGY9 312 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 CFAP61Q8NHU2 1237 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 FLVCR1-AS1Q8TAF5 88 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 SKA2Q8WVK7 121 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 ZUFSPQ96AP4 578 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 RAD51AP1Q96B01 352 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 HES6Q96HZ4 224 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 C5orf34Q96MH7 638 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 FOPNLQ96NB1 174 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 AGAP4Q96P64 663 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 PANX3Q96QZ0 392 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 WDR77Q9BQA1 342 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 ZNF552Q9H707 407 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 CUTCQ9NTM9 273 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 CATSPERZQ9NTU4 200 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 ASF1BQ9NVP2 202 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 FAM53CQ9NYF3 392 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 PAK5Q9P286 719 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 GNPTGQ9UJJ9 305 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 CDC23Q9UJX2 597 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 PACSIN2Q9UNF0 486 aaPredicted RBP6.88□□□□□ -1.31
USP46-208ENST00000512656 FAM169AQ9Y6X4 670 aa6.88□□□□□ -1.31
USP46-208ENST00000512656 TCRBV7S2A1N4TA0A589 114 aa6.87□□□□□ -1.31
USP46-208ENST00000512656 GOLGA6L6A8MZA4 724 aa6.87□□□□□ -1.31
USP46-208ENST00000512656 CD3EAPO15446 510 aaKnown RBP6.87□□□□□ -1.31
USP46-208ENST00000512656 HCRTR1O43613 425 aa6.87□□□□□ -1.31
USP46-208ENST00000512656 LIASO43766 372 aa6.87□□□□□ -1.31
USP46-208ENST00000512656 KRT86O43790 486 aa6.87□□□□□ -1.31
USP46-208ENST00000512656 CNOT3O75175 753 aaKnown RBP6.87□□□□□ -1.31
USP46-208ENST00000512656 NDUFS3O75489 264 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms