RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 CCDC138Q96M89 665 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 OR2A5Q96R48 311 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 MACROD1Q9BQ69 325 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 SLC25A23Q9BV35 468 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 UNKQ9C0B0 810 aaKnown RBP12.68□□□□□ -0.38
RNF4-215ENST00000511843 EPN3Q9H201 632 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 UTP6Q9NYH9 597 aaKnown RBP12.68□□□□□ -0.38
RNF4-215ENST00000511843 ANKMY1Q9P2S6 941 aa12.68□□□□□ -0.38
RNF4-215ENST00000511843 CORO1CQ9ULV4 474 aaPredicted RBP12.68□□□□□ -0.38
RNF4-215ENST00000511843 RUVBL1Q9Y265 456 aaKnown RBP12.68□□□□□ -0.38
RNF4-215ENST00000511843 ESYT3A0FGR9 886 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 FEZF1A0PJY2 475 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 NPEPPSL1A6NEC2 478 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 CDC7O00311 574 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
RNF4-215ENST00000511843 GUCA1CO95843 209 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 TAS2R39P59534 338 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 GPX6P59796 221 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 SSPNQ14714 243 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 NAA25Q14CX7 972 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 NKG7Q16617 165 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 FAM214AQ32MH5 1076 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 CEP97Q8IW35 865 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 SHISA5Q8N114 240 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 FDCSPQ8NFU4 85 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 FBXO25Q8TCJ0 367 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 ANKRD49Q8WVL7 239 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 ZNF592Q92610 1267 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 COL26A1Q96A83 441 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 FKBP10Q96AY3 582 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 SPSB2Q99619 263 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 C17orf62Q9BQA9 187 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 NUDT9Q9BW91 350 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 CAB39LQ9H9S4 337 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 ZNF304Q9HCX3 659 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 ENAMQ9NRM1 1142 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 P4HTMQ9NXG6 502 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 ARL15Q9NXU5 204 aa12.67□□□□□ -0.38
RNF4-215ENST00000511843 MTO1Q9Y2Z2 717 aaKnown RBP12.67□□□□□ -0.38
RNF4-215ENST00000511843 MRPS2Q9Y399 296 aaKnown RBP12.67□□□□□ -0.38
RNF4-215ENST00000511843 UTP11Q9Y3A2 253 aaKnown RBP12.67□□□□□ -0.38
RNF4-215ENST00000511843 TCRBV9S1A1TA0A576 114 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 SLC16A5O15375 505 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 CDH1P12830 882 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 EZRP15311 586 aaKnown RBP12.66□□□□□ -0.38
RNF4-215ENST00000511843 ZNF37AP17032 561 aaPredicted RBP12.66□□□□□ -0.38
RNF4-215ENST00000511843 GMPRP36959 345 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 PGDP52209 483 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 ABATP80404 500 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 MEF2AQ02078 507 aaPredicted RBP12.66□□□□□ -0.38
RNF4-215ENST00000511843 CBLBQ13191 982 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 MUM1Q2TAK8 710 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 YOD1Q5VVQ6 348 aaPredicted RBP12.66□□□□□ -0.38
RNF4-215ENST00000511843 SBSNQ6UWP8 590 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 ZNF572Q7Z3I7 529 aaPredicted RBP12.66□□□□□ -0.38
RNF4-215ENST00000511843 SLC26A11Q86WA9 606 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 SPATA6LQ8N4H0 392 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 RERGQ96A58 199 aaPredicted RBP12.66□□□□□ -0.38
RNF4-215ENST00000511843 PTERQ96BW5 349 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 VPS39Q96JC1 886 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 OR4K3Q96R72 315 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 MCMBPQ9BTE3 642 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 LRRC1Q9BTT6 524 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 SGPP1Q9BX95 441 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 LUZP4Q9P127 313 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 CDC23Q9UJX2 597 aa12.66□□□□□ -0.38
RNF4-215ENST00000511843 A0A0A6YYC8 382 aaPredicted RBP12.65□□□□□ -0.38
RNF4-215ENST00000511843 I3L1I5 382 aaPredicted RBP12.65□□□□□ -0.38
RNF4-215ENST00000511843 NDC80O14777 642 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 FOXS1O43638 330 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 CEACAM4O75871 244 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 FAM155BO75949 473 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 ONECUT2O95948 504 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 HIST1H2AGP0C0S8 130 aaPredicted RBP12.65□□□□□ -0.38
RNF4-215ENST00000511843 PIM1P11309 404 aaPredicted RBP12.65□□□□□ -0.38
RNF4-215ENST00000511843 HIST1H2ADP20671 130 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 FBLP22087 321 aaKnown RBP12.65□□□□□ -0.38
RNF4-215ENST00000511843 CASRP41180 1078 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 CSNK1G2P78368 415 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 KLRB1Q12918 225 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 EFTUD2Q15029 972 aaKnown RBP eCLIP12.65□□□□□ -0.388e-8■■■□□ 16.7
RNF4-215ENST00000511843 SYT16Q17RD7 645 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 NADK2Q4G0N4 442 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 VWA2Q5GFL6 755 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 MED25Q71SY5 747 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 PRSS41Q7RTY9 318 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 VN1R4Q7Z5H5 301 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 C17orf64Q86WR6 236 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 ARHGEF39Q8N4T4 335 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
RNF4-215ENST00000511843 HIST1H2AHQ96KK5 128 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 HIST1H2AJQ99878 128 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 H2AFJQ9BTM1 129 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 YIPF2Q9BWQ6 316 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 RAB17Q9H0T7 212 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 SLC26A1Q9H2B4 701 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 RHOJQ9H4E5 214 aa12.65□□□□□ -0.38
RNF4-215ENST00000511843 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms