RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SPATA22Q8NHS9 363 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 TANKQ92844 425 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 RHBDF1Q96CC6 855 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 ELMOD3Q96FG2 381 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CNOT6LQ96LI5 555 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 C3orf30Q96M34 536 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 NEUROD6Q96NK8 337 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 OR1F2PQ96R84 312 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 MAGIXQ9H6Y5 334 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 GAREM1Q9H706 876 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 SEBOXQ9HB31 216 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 SMARCAL1Q9NZC9 954 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 UBA2Q9UBT2 640 aaPredicted RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CLIP2Q9UDT6 1046 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 FBXL17Q9UF56 701 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 OR14J1Q9UGF5 321 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 FBXW11Q9UKB1 542 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 ICAM5Q9UMF0 924 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 R3HDM2Q9Y2K5 976 aaKnown RBP3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 PCDHGA1Q9Y5H4 931 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 CLIC4Q9Y696 253 aa3.44□□□□□ -1.86
TOPBP1-208ENST00000511439 TNRC6BQ9UPQ9 1833 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 hCG_1807616A0A1W2PRN6 198 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ESYT2A0FGR8 921 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 CHADO15335 359 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 MID1O15344 667 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 SPINT2O43291 252 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 HS6ST1O60243 411 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 IDH1O75874 414 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 PMS2P2O95744 297 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 RNF224P0DH78 156 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 GNSP15586 552 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 CEBPBP17676 345 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ACSL1P33121 698 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 SLC11A1P49279 550 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 CAMPP49913 170 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ART1P52961 327 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ERVPABLB-1P60509 514 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 FOXM1Q08050 763 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ACSM2AQ08AH3 577 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 EPS8Q12929 822 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 CHAF1BQ13112 559 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 SF3B4Q15427 424 aaKnown RBP eCLIP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 DECR1Q16698 335 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 PNLIPRP3Q17RR3 467 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 RILPL1Q5EBL4 403 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 FAM78AQ5JUQ0 283 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 HES3Q5TGS1 186 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ACSM2BQ68CK6 577 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 CLEC17AQ6ZS10 378 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 C16orf82Q7Z2V1 217 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ECHDC2Q86YB7 292 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 MFSD6LQ8IWD5 586 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 LSMEM2Q8N112 164 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 SRBD1Q8N5C6 995 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 C1orf131Q8NDD1 294 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 OR8K5Q8NH50 307 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 LILRB1Q8NHL6 650 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 RPLP0P6Q8NHW5 317 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 SMARCD2Q92925 531 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 TAAR8Q969N4 342 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ORAI1Q96D31 301 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 RTP4Q96DX8 246 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 EGLN2Q96KS0 407 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 RIOK1Q9BRS2 568 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 PLK3Q9H4B4 646 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 FAM124BQ9H5Z6 455 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF224Q9NZL3 707 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 OGFRQ9NZT2 677 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 SUCLA2Q9P2R7 463 aaPredicted RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 COPG2Q9UBF2 871 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 NENFQ9UMX5 172 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 GINS2Q9Y248 185 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 CRYBG3Q68DQ2 2970 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 THADAQ6YHU6 1953 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 MYO16Q9Y6X6 1858 aa3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 GOLGA4Q13439 2230 aaKnown RBP3.43□□□□□ -1.86
TOPBP1-208ENST00000511439 GREB1LQ9C091 1923 aaPredicted RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 A0A1W2PQ09 198 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 HIST1H2ABP04908 130 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 SRPRAP08240 638 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 ANXA7P20073 488 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 HIST1H2ADP20671 130 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 P2RY2P41231 377 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 APOBEC1P41238 236 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 LRMPQ12912 555 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 KIF19Q2TAC6 998 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF805Q5CZA5 627 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 KCNT1Q5JUK3 1230 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 MARCH8Q5T0T0 291 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 DCST1Q5T197 706 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 ARHGEF16Q5VV41 709 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 C9orf57Q5W0N0 161 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 LCN10Q6JVE6 187 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 BRAT1Q6PJG6 821 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 IL27RAQ6UWB1 636 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 C16orf54Q6UWD8 224 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 PRSS57Q6UWY2 283 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms