RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FBXL8Q96CD0 374 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ZFYVE21Q9BQ24 234 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 TRIM55Q9BYV6 548 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 SLC7A5P2Q9GIP4 190 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CCDC177Q9NQR7 707 aaPredicted RBP12.96□□□□□ -0.33
SNF8-206ENST00000509989 CUTCQ9NTM9 273 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 NSMCE4AQ9NXX6 385 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 NDOR1Q9UHB4 597 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 RUVBL1Q9Y265 456 aaKnown RBP12.96□□□□□ -0.33
SNF8-206ENST00000509989 ASB1Q9Y576 335 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 TLN1Q9Y490 2541 aaKnown RBP12.96□□□□□ -0.34
SNF8-206ENST00000509989 COL6A6A6NMZ7 2263 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 HYKKA2RU49 373 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 FITM1A5D6W6 292 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 NCF1BA6NI72 391 aaPredicted RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 NCF1CA8MVU1 366 aaPredicted RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 FKBP9O95302 570 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 KLK3P07288 261 aaPredicted RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 NCF1P14598 390 aaPredicted RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 NR1D1P20393 614 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 STX2P32856 288 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 HSD17B2P37059 387 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 BCL6P41182 706 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 RAB10P61026 200 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 CSHL1Q14406 222 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 SLMAPQ14BN4 828 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 NCF4Q15080 339 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 UAP1Q16222 522 aaPredicted RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 PRTGQ2VWP7 1150 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 NKAIN1Q4KMZ8 207 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 GLE1Q53GS7 698 aaKnown RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 ZC3H12BQ5HYM0 836 aaKnown RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 MROH9Q5TGP6 573 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 LRRC8EQ6NSJ5 796 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 PRSS41Q7RTY9 318 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 RELL1Q8IUW5 271 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 NKAPQ8N5F7 415 aaKnown RBP12.95□□□□□ -0.34
SNF8-206ENST00000509989 MOCOSQ96EN8 888 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 UBXN10Q96LJ8 280 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 FMO2Q99518 471 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 TMEM79Q9BSE2 394 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 NLNQ9BYT8 704 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 ACSS3Q9H6R3 686 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 L2HGDHQ9H9P8 463 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 IGSF5Q9NSI5 407 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 CTNNAL1Q9UBT7 734 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 TCFL5Q9UL49 500 aa12.95□□□□□ -0.34
SNF8-206ENST00000509989 C21orf140B9A014 251 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 DSCR3O14972 297 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 FOXS1O43638 330 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 PRAMEF4O60810 478 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 DNAJB6O75190 326 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 B3GALT4O96024 378 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 STMN1P16949 149 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 GCAP28676 217 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 SPRP35270 261 aaPredicted RBP12.94□□□□□ -0.34
SNF8-206ENST00000509989 EFNA3P52797 238 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 SYT16Q17RD7 645 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 PRAMEF9Q5VWM5 478 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 MRPL14Q6P1L8 145 aaKnown RBP12.94□□□□□ -0.34
SNF8-206ENST00000509989 LCTLQ6UWM7 567 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 CENPLQ8N0S6 344 aaPredicted RBP12.94□□□□□ -0.34
SNF8-206ENST00000509989 PLD6Q8N2A8 252 aaKnown RBP12.94□□□□□ -0.34
SNF8-206ENST00000509989 KCTD4Q8WVF5 259 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 EXT2Q93063 718 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 NEIL2Q969S2 332 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 NXNL1Q96CM4 212 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 NDC1Q9BTX1 674 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 FUT8Q9BYC5 575 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 DERL2Q9GZP9 239 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 EPB41L4BQ9H329 900 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 POPDC3Q9HBV1 291 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 ENAMQ9NRM1 1142 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 ZNF358Q9NW07 568 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 TXNDC16Q9P2K2 825 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 CTSFQ9UBX1 484 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 MTRF1LQ9UGC7 380 aaKnown RBP12.94□□□□□ -0.34
SNF8-206ENST00000509989 KCND3Q9UK17 655 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 NOVA2Q9UNW9 492 aaKnown RBP12.94□□□□□ -0.34
SNF8-206ENST00000509989 SLC22A14Q9Y267 594 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 OARD1Q9Y530 152 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 KCNMB2Q9Y691 235 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 AP1M2Q9Y6Q5 423 aa12.94□□□□□ -0.34
SNF8-206ENST00000509989 ZNF839A8K0R7 811 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 ALOX12BO75342 701 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 ALDOAP04075 364 aaKnown RBP12.93□□□□□ -0.34
SNF8-206ENST00000509989 ITGB2P05107 769 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 UMODP07911 640 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 RAB40ALP0C0E4 278 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 HIST1H2AGP0C0S8 130 aaPredicted RBP12.93□□□□□ -0.34
SNF8-206ENST00000509989 HIST1H2ADP20671 130 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 VARSP26640 1264 aaKnown RBP12.93□□□□□ -0.34
SNF8-206ENST00000509989 SLC12A2P55011 1212 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 POLE2P56282 527 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 RPS15P62841 145 aaKnown RBP12.93□□□□□ -0.34
SNF8-206ENST00000509989 ABATP80404 500 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 DCDP81605 110 aaKnown RBP12.93□□□□□ -0.34
SNF8-206ENST00000509989 GRM7Q14831 915 aa12.93□□□□□ -0.34
SNF8-206ENST00000509989 TGFBIQ15582 683 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms