RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CCDC50Q8IVM0 306 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 C10orf67Q8IYJ2 551 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 ZNF786Q8N393 782 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 CERS5Q8N5B7 392 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 ABHD5Q8WTS1 349 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 RIT1Q92963 219 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 CIDECQ96AQ7 238 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 CCDC17Q96LX7 622 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 FANCD2OSQ96PS1 177 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 CCNL2Q96S94 520 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 DIRC2Q96SL1 478 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 CHRDL1Q9BU40 450 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 RAB1BQ9H0U4 201 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 TMEM245Q9H330 911 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 DPEP2Q9H4A9 486 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 KIF9Q9HAQ2 790 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 LRRC4Q9HBW1 653 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 MRPS30Q9NP92 439 aaKnown RBP7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 THAP1Q9NVV9 213 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 NAGKQ9UJ70 344 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 METRNQ9UJH8 293 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 ADGRB1O14514 1584 aa7.25□□□□□ -1.25
PDGFRA-206ENST00000508170 NPATQ14207 1427 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 TUBAL3A6NHL2 446 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 ZBTB11O95625 1053 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 LYNP07948 512 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 ITGB5P18084 799 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 NTSR1P30989 418 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SLC1A4P43007 532 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 RGS7P49802 495 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 EPHA5P54756 1037 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 EMP2P54851 167 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 NLRP11P59045 1033 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 IFFO1Q0D2I5 559 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 PTPRRQ15256 657 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 FAM189A2Q15884 450 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SMN1Q16637 294 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CDONQ4KMG0 1287 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 NKAIN2Q5VXU1 208 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 GDF6Q6KF10 455 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 C17orf99Q6UX52 265 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 ZNF551Q7Z340 670 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 PALB2Q86YC2 1186 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 ZNF397Q8NF99 534 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 DTD1Q8TEA8 209 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 ISL2Q96A47 359 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 REPS1Q96D71 796 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 IL22Q9GZX6 179 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 WWP1Q9H0M0 922 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SP140LQ9H930 580 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 COG4Q9H9E3 785 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CSNK1G1Q9HCP0 422 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 RANGRFQ9HD47 186 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 FAM207AQ9NSI2 230 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 DTLQ9NZJ0 730 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 NXF1Q9UBU9 619 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SIX4Q9UIU6 781 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 MBLAC1A4D2B0 266 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 WASHC1A8K0Z3 465 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 WASH3PC4AMC7 463 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 DENRO43583 198 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 NRP2O60462 931 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 BCAR3O75815 825 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CEACAM1P13688 526 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SDHBP21912 280 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 APOBEC3AP31941 199 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 YWHABP31946 246 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 THBS4P35443 961 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CHI3L1P36222 383 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CSTF1Q05048 431 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 DMWDQ09019 674 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SHBQ15464 509 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CA9Q16790 459 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 ME3Q16798 604 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 WASH2PQ6VEQ5 465 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 FAM35AQ86V20 835 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 TBC1D10CQ8IV04 446 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 KBTBD2Q8IY47 623 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 Q8NA96 180 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 OR5M1Q8NGP8 315 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 KCNG3Q8TAE7 436 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SLC25A36Q96CQ1 311 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 SPAG8Q99932 426 aaPredicted RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 ZNF559Q9BR84 538 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 FAM213AQ9BRX8 229 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 MMP27Q9H306 513 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 PLEKHA4Q9H4M7 779 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 KLHL1Q9NR64 748 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 MARCH2Q9P0N8 246 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 FTSJ1Q9UET6 329 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 APOBEC3BQ9UH17 382 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 IL17BQ9UHF5 180 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 MAGEL2Q9UJ55 1249 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CDH9Q9ULB4 789 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 PSMD13Q9UNM6 376 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 EXOGQ9Y2C4 368 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 POFUT2Q9Y2G5 429 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 AAR2Q9Y312 384 aaKnown RBP7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 TSC22D4Q9Y3Q8 395 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms