RNA–Protein interactions for RNA: ENST00000507471.1

TSPAN17-206, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 707 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-206ENST00000507471 OR2A5Q96R48 311 aa13.12□□□□□ -0.31
TSPAN17-206ENST00000507471 TUBB6Q9BUF5 446 aa13.12□□□□□ -0.31
TSPAN17-206ENST00000507471 MRPS30Q9NP92 439 aaKnown RBP13.12□□□□□ -0.31
TSPAN17-206ENST00000507471 TSR3Q9UJK0 312 aaKnown RBP13.12□□□□□ -0.31
TSPAN17-206ENST00000507471 AMFRQ9UKV5 643 aa13.12□□□□□ -0.31
TSPAN17-206ENST00000507471 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
TSPAN17-206ENST00000507471 MATN4O95460 622 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 C8orf89P0DMQ9 161 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 MYBL2P10244 700 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 RPS3P23396 243 aaKnown RBP eCLIP13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 EIF3BP55884 814 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 MAT1AQ00266 395 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 GBX1Q14549 363 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 OASLQ15646 514 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 LONRF1Q17RB8 773 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 ZNF766Q5HY98 468 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 CTSL3PQ5NE16 218 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 MYO7BQ6PIF6 2116 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 PEX26Q7Z412 305 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 PRUNE1Q86TP1 453 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 LRRC6Q86X45 466 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 UBL4BQ8N7F7 174 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 OR9A1PQ8NGU1 263 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 ADAMTS18Q8TE60 1221 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 BIRC8Q96P09 236 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 DRC3Q9H069 523 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 TREX1Q9NSU2 369 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 TEKT2Q9UIF3 430 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 ZNF835Q9Y2P0 537 aa13.11□□□□□ -0.31
TSPAN17-206ENST00000507471 NCOA6Q14686 2063 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 ARHGEF33A8MVX0 844 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 MIF4GDA9UHW6 222 aaKnown RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 P2RX6O15547 441 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 LIASO43766 372 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 NDUFS3O75489 264 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 SEC24DO94855 1032 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 FTCDO95954 541 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 IFNB1P01574 187 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 ESRRAP11474 423 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 SSTR2P30874 369 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 RPA3P35244 121 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 SMSP52788 366 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 CRADDP78560 199 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 ANKRD20A4Q4UJ75 823 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 PCID2Q5JVF3 399 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 ZNF425Q6IV72 752 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 Q6ZPB1 254 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 LANCL3Q6ZV70 420 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 SHISA5Q8N114 240 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 BEST3Q8N1M1 668 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 MPP5Q8N3R9 675 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 THAP3Q8WTV1 239 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 SMPDL3AQ92484 453 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 RERGQ96A58 199 aaPredicted RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 MTFMTQ96DP5 389 aaKnown RBP13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 MAGED4Q96JG8 741 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 GPR137Q96N19 417 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 VN1R1Q9GZP7 353 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 TSPY26PQ9H489 355 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 TAC3Q9UHF0 121 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 PCYOX1Q9UHG3 505 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 PCDHGB6Q9Y5F9 930 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 ADGRG4Q8IZF6 3080 aa13.1□□□□□ -0.31
TSPAN17-206ENST00000507471 IGHV3-20A0A0C4DH32 117 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 A8MUI8 341 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 MYO1CO00159 1063 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 HAT1O14929 419 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 NIPSNAP2O75323 286 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 IPO7O95373 1038 aaKnown RBP13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 CLDN14O95500 239 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 APRTP07741 180 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 PKMP14618 531 aaKnown RBP13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 ETS1P14921 441 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 EZRP15311 586 aaKnown RBP13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 NMBRP28336 390 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 ATP5DP30049 168 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 KRTAP10-9P60411 292 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 TSTA3Q13630 321 aaPredicted RBP13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 FAM53BQ14153 422 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 TESK1Q15569 626 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 BTBD16Q32M84 506 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 ACER2Q5QJU3 275 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 ICE2Q659A1 982 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 FCRLBQ6BAA4 426 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 PLAG1Q6DJT9 500 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 H3F3CQ6NXT2 135 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 RAD9BQ6WBX8 426 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 NCCRP1Q6ZVX7 275 aaPredicted RBP13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 PPFIBP2Q8ND30 876 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 MDS2Q8NDY4 140 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 ACRBPQ8NEB7 543 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 METTL21AQ8WXB1 218 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 FAM136AQ96C01 138 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
TSPAN17-206ENST00000507471 CYTH2Q99418 400 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms