RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 EBLN1P0CF75 366 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 ARL1P40616 181 aaPredicted RBP13.63□□□□□ -0.23
RNF4-208ENST00000507247 CASP2P42575 452 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 PKNOX1P55347 436 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 CSNK1G2P78368 415 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 REEP5Q00765 189 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 SLBPQ14493 270 aaKnown RBP eCLIP13.63□□□□□ -0.23
RNF4-208ENST00000507247 TBCCQ15814 346 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 ZIC1Q15915 447 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 GRHL2Q6ISB3 625 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 TMEM71Q6P5X7 295 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 FIGLAQ6QHK4 219 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 ZNF574Q6ZN55 896 aaPredicted RBP13.63□□□□□ -0.23
RNF4-208ENST00000507247 FAM47EQ6ZV65 393 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 PAQR7Q86WK9 346 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 PLXDC1Q8IUK5 500 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 ZNF781Q8N8C0 355 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 ZNF740Q8NDX6 193 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 OR4K1Q8NGD4 311 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 AGR3Q8TD06 166 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 NETO1Q8TDF5 533 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 GRAMD1AQ96CP6 724 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 PTCD3Q96EY7 689 aaKnown RBP13.63□□□□□ -0.23
RNF4-208ENST00000507247 ZDHHC12Q96GR4 267 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 TRAPPC9Q96Q05 1148 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 PLCD4Q9BRC7 762 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 SEMA6CQ9H3T2 930 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 EHD1Q9H4M9 534 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 EML4Q9HC35 981 aaKnown RBP13.63□□□□□ -0.23
RNF4-208ENST00000507247 C1GALT1Q9NS00 363 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 TMEM184CQ9NVA4 438 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 GEMIN8Q9NWZ8 242 aaKnown RBP13.63□□□□□ -0.23
RNF4-208ENST00000507247 TRPS1Q9UHF7 1281 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 HAO1Q9UJM8 370 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 STK38LQ9Y2H1 464 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 KLK4Q9Y5K2 254 aa13.63□□□□□ -0.23
RNF4-208ENST00000507247 IGHV5-51A0A0C4DH38 117 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 OR2A25A4D2G3 310 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 SLC9B1P1A6NJY1 282 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 D6RAR5 112 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 TM4SF5O14894 197 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 HAT1O14929 419 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 UGDHO60701 494 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 RFPL3O75679 317 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 CLDN9O95484 217 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 JUPP14923 745 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 CCR8P51685 355 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 GNGT1P63211 74 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 TRIP6Q15654 476 aaKnown RBP13.62□□□□□ -0.23
RNF4-208ENST00000507247 GGTA1PQ4G0N0 100 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 CCDC157Q569K6 752 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 TCHHL1Q5QJ38 904 aaPredicted RBP13.62□□□□□ -0.23
RNF4-208ENST00000507247 SNAP47Q5SQN1 464 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 SH2D4BQ5SQS7 431 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 LIPJQ5W064 366 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 CLEC6AQ6EIG7 209 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 ADCK2Q7Z695 626 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 GLRX5Q86SX6 157 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 MYLK4Q86YV6 388 aaPredicted RBP13.62□□□□□ -0.23
RNF4-208ENST00000507247 PLD3Q8IV08 490 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 CDYL2Q8N8U2 506 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 C7orf26Q96N11 449 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 GFM1Q96RP9 751 aaKnown RBP13.62□□□□□ -0.23
RNF4-208ENST00000507247 CD180Q99467 661 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 SYNPO2LQ9H987 977 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 PNPOQ9NVS9 261 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 SEMA5BQ9P283 1151 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 ANKMY1Q9P2S6 941 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 FIS1Q9Y3D6 152 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 RAP2CQ9Y3L5 183 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 TIMM22Q9Y584 194 aa13.62□□□□□ -0.23
RNF4-208ENST00000507247 FEZF1A0PJY2 475 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 A8MU76 341 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 FFAR3O14843 346 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 GIPC1O14908 333 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 GPR42O15529 346 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 LCMT2O60294 686 aaKnown RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 EDF1O60869 148 aaKnown RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 CTSVO60911 334 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 CAPN1P07384 714 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 HGFP14210 728 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 HRH2P25021 359 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 SERPINB3P29508 390 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 LSP1P33241 339 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 HNF4AP41235 474 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 HTR6P50406 440 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 SPIDRQ14159 915 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 CPSF6Q16630 551 aaKnown RBP eCLIP13.61□□□□□ -0.23
RNF4-208ENST00000507247 RSPO4Q2I0M5 234 aaPredicted RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 CACHD1Q5VU97 1274 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 KANK2Q63ZY3 851 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 ADNP2Q6IQ32 1131 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 PRSS42Q7Z5A4 293 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 MTERF4Q7Z6M4 381 aaKnown RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 SLITRK4Q8IW52 837 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 C19orf47Q8N9M1 422 aaKnown RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 OR4D9Q8NGE8 314 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 ZNF317Q96PQ6 595 aaPredicted RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 AIF1LQ9BQI0 150 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 EFCAB11Q9BUY7 163 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms