RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ILF2Q12905 390 aaKnown RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 SUSD1Q6UWL2 747 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 ISLR2Q6UXK2 745 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 RIPOR1Q6ZS17 1223 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 SYDE1Q6ZW31 735 aaPredicted RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 UBE2R2Q712K3 238 aaPredicted RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 NDUFAF7Q7L592 441 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 ADCK2Q7Z695 626 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 GALNT7Q86SF2 657 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 KCNMB4Q86W47 210 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 KBTBD2Q8IY47 623 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 OR4N4Q8N0Y3 316 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 CD200R1Q8TD46 325 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 MS4A14Q96JA4 679 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 HIST1H2AHQ96KK5 128 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 C10orf90Q96M02 699 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 OR2A5Q96R48 311 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 GPR21Q99679 349 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 HIST1H2AJQ99878 128 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 H2AFJQ9BTM1 129 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 DRC3Q9H069 523 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 CCDC177Q9NQR7 707 aaPredicted RBP13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 RIC8BQ9NVN3 520 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 SNX12Q9UMY4 172 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 PCDHGA10Q9Y5H3 936 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 MAU2Q9Y6X3 613 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 CNTRLQ7Z7A1 2325 aa13.74□□□□□ -0.21
HMGCS1-203ENST00000507004 KCNE1BA0A087WTH5 132 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 NSG1A0A0A6YYJ2 146 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 H0YIG0 161 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 NDC80O14777 642 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 MYBL2P10244 700 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 GRK3P35626 688 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 SLC26A3P40879 764 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 RPS15AP62244 130 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 MFAP5Q13361 173 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 HSP90AA5PQ58FG0 334 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 CRB2Q5IJ48 1285 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 ATG9BQ674R7 924 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 RPUSD3Q6P087 351 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 CYHR1Q6ZMK1 362 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 MYO1HQ8N1T3 1032 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 C2CD4AQ8NCU7 369 aaPredicted RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 GIMAP7Q8NHV1 300 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 THOC3Q96J01 351 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 BARD1Q99728 777 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 TRIM54Q9BYV2 358 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 LUZP4Q9P127 313 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 GALPQ9UBC7 116 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 TRPC4Q9UBN4 977 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 ASIC3Q9UHC3 531 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 PCYOX1Q9UHG3 505 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 TSR3Q9UJK0 312 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 RUVBL1Q9Y265 456 aaKnown RBP13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 MED16Q9Y2X0 877 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 HEATR5BQ9P2D3 2071 aa13.73□□□□□ -0.21
HMGCS1-203ENST00000507004 NAV2Q8IVL1 2488 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 DNALI1O14645 258 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 SERPINA7P05543 415 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 HEXBP07686 556 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 IMPA1P29218 277 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 GLRBP48167 497 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 SKP1P63208 163 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 CUL1Q13616 776 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 CRYMQ14894 314 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 ZNF169Q14929 603 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 INAQ16352 499 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 NIPAL1Q6NVV3 410 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 ZNF549Q6P9A3 640 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 CNTN4Q8IWV2 1026 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 LRRC56Q8IYG6 542 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 CPNE9Q8IYJ1 553 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 PDIK1LQ8N165 341 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 SLC35F6Q8N357 371 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 CISD2Q8N5K1 135 aaKnown RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 METTL27Q8N6F8 245 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 CAMKVQ8NCB2 501 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 DNAJB14Q8TBM8 379 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 LRRC39Q96DD0 335 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 MMABQ96EY8 250 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 HAUS8Q9BT25 410 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 YIPF2Q9BWQ6 316 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 PARVBQ9HBI1 364 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 IARS2Q9NSE4 1012 aaKnown RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 ASF1BQ9NVP2 202 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 C19orf25Q9UFG5 118 aaPredicted RBP13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 PCSK5Q92824 1860 aa13.72□□□□□ -0.21
HMGCS1-203ENST00000507004 IGKV1-8A0A0C4DH67 115 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 DYTNA2CJ06 578 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 ANKUB1A6NFN9 424 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 IDSB3KWA1 339 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 HAUS5O94927 633 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 BMP10O95393 424 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 CBX6O95503 412 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 IL10P22301 178 aa13.71□□□□□ -0.21
HMGCS1-203ENST00000507004 AP1S2P56377 157 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms