RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ASCL3Q9NQ33 180 aa8.13□□□□□ -1.11
PDGFC-205ENST00000506880 SOHLH2Q9NX45 425 aa8.13□□□□□ -1.11
PDGFC-205ENST00000506880 SLC39A1Q9NY26 324 aa8.13□□□□□ -1.11
PDGFC-205ENST00000506880 PILRAQ9UKJ1 303 aa8.13□□□□□ -1.11
PDGFC-205ENST00000506880 ADAMTS6Q9UKP5 1117 aa8.13□□□□□ -1.11
PDGFC-205ENST00000506880 ATXN7L1Q9ULK2 861 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-205ENST00000506880 PCDHGA11Q9Y5H2 935 aa8.13□□□□□ -1.11
PDGFC-205ENST00000506880 BLACEA4D250 179 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SUPT3HB4E1H0 165 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 E7EQ34 232 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 BIRC5O15392 142 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SUPT3HO75486 399 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 OTCP00480 354 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ALBP02768 609 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SHBGP04278 402 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 KLK3P07288 261 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 RAB40ALP0C0E4 278 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SLC35G6P0C7Q6 338 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 EBLN1P0CF75 366 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 LIPCP11150 499 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PYGBP11216 843 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 FGF3P11487 239 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 HSD3B1P14060 373 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ST6GAL1P15907 406 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 IMPDH1P20839 514 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 HSD3B2P26439 372 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PEBP1P30086 187 aaKnown RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PIK3CBP42338 1070 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 GABRA4P48169 554 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PKNOX1P55347 436 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 MC1RQ01726 317 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 TGM3Q08188 693 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF844Q08AG5 666 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ABHD18Q0P651 414 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 BMPR2Q13873 1038 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF460Q14592 562 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 CASP8Q14790 479 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 C16orf72Q14CZ0 275 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 OR4D1Q15615 310 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 MUM1Q2TAK8 710 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 AGBL2Q5U5Z8 902 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 RHBDD2Q6NTF9 364 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 NXPE4Q6UWF7 544 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF517Q6ZMY9 492 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 FAM92BQ6ZTR7 304 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 TMPRSS9Q7Z410 1059 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 B3GNT8Q7Z7M8 397 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 THOC6Q86W42 341 aaKnown RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF761Q86XN6 746 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 FAM129CQ86XR2 697 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 BANPQ8N9N5 519 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 L3MBTL4Q8NA19 623 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 TTC29Q8NA56 475 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ZNF248Q8NDW4 579 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 RAB3IL1Q8TBN0 382 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ADAMTS18Q8TE60 1221 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 NAT14Q8WUY8 206 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 FKBP10Q96AY3 582 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PRR11Q96HE9 360 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 IP6K3Q96PC2 410 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ZIM3Q96PE6 472 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 CENPKQ9BS16 269 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 DPH7Q9BTV6 452 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SHCBP1LQ9BZQ2 653 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SPRY4Q9C004 299 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 ROGDIQ9GZN7 287 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 DRC3Q9H069 523 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 RHBGQ9H310 441 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 CCDC86Q9H6F5 360 aaKnown RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SYNDIG1Q9H7V2 258 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 RRAGDQ9NQL2 400 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PFDN4Q9NQP4 134 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PRDM9Q9NQV7 894 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 NMRK1Q9NWW6 199 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SPHK1Q9NYA1 384 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 TAC3Q9UHF0 121 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 KCND3Q9UK17 655 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 NXT1Q9UKK6 140 aaKnown RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SATB2Q9UPW6 733 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 PLLPQ9Y342 182 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SLC22A7Q9Y694 548 aa8.12□□□□□ -1.11
PDGFC-205ENST00000506880 V9GYY5 206 aaPredicted RBP8.12□□□□□ -1.11
PDGFC-205ENST00000506880 SDK2Q58EX2 2172 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SERTM1A2A2V5 107 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 TRABD2BA6NFA1 517 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 SLC9B1P1A6NJY1 282 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 EFCAB7A8K855 629 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 HMGB1P1B2RPK0 211 aaPredicted RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 H0YIG0 161 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 H0YIV9 168 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 H3BMH7 237 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 FOXE1O00358 373 aaPredicted RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 RRP8O43159 456 aaKnown RBP8.11□□□□□ -1.11
PDGFC-205ENST00000506880 PLIN3O60664 434 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 CLEC3AO75596 197 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 WFS1O76024 890 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 TNFSF15O95150 251 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 GUCA1CO95843 209 aa8.11□□□□□ -1.11
PDGFC-205ENST00000506880 DLGAP3O95886 979 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms